Basic Information

Insect: Pyrrhia umbra
Gene Symbol: -
Assembly: GCA_963891755.1
Location: OY982919.1:10954287-10962229[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 3.6 3.1e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 21 0.099 8.6 7.9 4.1 1 23 84 107 84 107 0.97

3 21 5.8 5e+02 2.3 4.0 1 23 189 211 189 211 0.96

4 21 0.002 0.17 13.2 1.0 2 23 217 238 216 238 0.97

5 21 2.4 2.1e+02 3.5 1.4 1 23 244 266 244 267 0.94

6 21 0.24 21 6.7 3.4 2 22 501 521 500 521 0.95

7 21 0.098 8.6 7.9 2.6 1 23 618 640 618 640 0.95

8 21 0.68 59 5.2 0.3 2 23 777 798 776 798 0.96

9 21 0.0013 0.11 13.8 0.5 2 23 878 899 877 899 0.96

10 21 0.39 34 6.0 2.0 1 23 907 929 907 929 0.97

11 21 5.7 5e+02 2.3 2.6 1 23 965 987 965 987 0.93

12 21 0.00028 0.024 15.9 4.0 1 23 995 1017 995 1017 0.99

13 21 0.12 10 7.6 1.9 1 23 1102 1124 1102 1124 0.99

14 21 0.2 18 6.9 2.0 1 20 1180 1199 1180 1202 0.93

15 21 1 90 4.7 0.1 2 23 1209 1230 1208 1230 0.94

16 21 0.044 3.8 9.0 2.5 1 23 1297 1319 1297 1319 0.94

17 21 0.0062 0.54 11.7 1.1 1 23 1325 1347 1325 1347 0.96

18 21 0.0077 0.67 11.4 2.6 1 23 1437 1459 1437 1459 0.97

19 21 0.00019 0.017 16.4 1.4 1 23 1465 1487 1465 1487 0.99

20 21 0.96 83 4.8 2.7 1 23 1579 1601 1579 1601 0.96

21 21 0.012 1 10.8 3.6 2 23 1613 1634 1613 1634 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	3.6	3.1e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	21	0.099	8.6	7.9	4.1	1	23	84	107	84	107	0.97
3	21	5.8	5e+02	2.3	4.0	1	23	189	211	189	211	0.96
4	21	0.002	0.17	13.2	1.0	2	23	217	238	216	238	0.97
5	21	2.4	2.1e+02	3.5	1.4	1	23	244	266	244	267	0.94
6	21	0.24	21	6.7	3.4	2	22	501	521	500	521	0.95
7	21	0.098	8.6	7.9	2.6	1	23	618	640	618	640	0.95
8	21	0.68	59	5.2	0.3	2	23	777	798	776	798	0.96
9	21	0.0013	0.11	13.8	0.5	2	23	878	899	877	899	0.96
10	21	0.39	34	6.0	2.0	1	23	907	929	907	929	0.97
11	21	5.7	5e+02	2.3	2.6	1	23	965	987	965	987	0.93
12	21	0.00028	0.024	15.9	4.0	1	23	995	1017	995	1017	0.99
13	21	0.12	10	7.6	1.9	1	23	1102	1124	1102	1124	0.99
14	21	0.2	18	6.9	2.0	1	20	1180	1199	1180	1202	0.93
15	21	1	90	4.7	0.1	2	23	1209	1230	1208	1230	0.94
16	21	0.044	3.8	9.0	2.5	1	23	1297	1319	1297	1319	0.94
17	21	0.0062	0.54	11.7	1.1	1	23	1325	1347	1325	1347	0.96
18	21	0.0077	0.67	11.4	2.6	1	23	1437	1459	1437	1459	0.97
19	21	0.00019	0.017	16.4	1.4	1	23	1465	1487	1465	1487	0.99
20	21	0.96	83	4.8	2.7	1	23	1579	1601	1579	1601	0.96
21	21	0.012	1	10.8	3.6	2	23	1613	1634	1613	1634	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGCCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCGGATGCCGCAGAGGACTTTGAATTACCACAGTGCAAGATAAGGAGGAATTATAATTGCACCAAGTGCACGTTCTATACACAGAACCCGCGCGCTTATCTTGTCCACACGCGTGACGCTCACTTTGTTAGACTGAAGATTTACGATTGTCCACACTGTGTTTACGCTTCGAGACATCATCAGAAACTTATAAGACACGTCAAAATGGTTCATGGAGGATCTAAGCCGACAGCAGCGGCTGCTAAAGTGGATGCTGAGTTATCACCTCCCTCCTATGAAAACATAGAACCAGCAGAGCGCATTGAAGACTTACTGGAGGAAGTCGAGGATTGTGAGGATATGATGATGGAAGTAGATGAAGACTCCTTGGAGCGACCTGATGATATCGATGGCGAGTGCGACAGAAGTGTTGACCAAGCAGCGCCCTCTGATGTCTCAAAAACTAAAGGGAAATTTTTCTCATGCGATAAGTGCAACTATGTCACCCACATAAGAGCTAGATTTACAAAACACGTCAAGTATCATTCGATGCCCATGATCAAGTGTACGATGTGTGATTTTCGAACACCATACAAATGGAATTTGGACAGACACATGAAGAACCACGGTGGAAGTGGAAGTTTCAATTGTTCGATGTGCAACTTTACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCACGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGACATGGGTCTACAATACGCGGAGAGAGAACTAGTCGGATGCAAAAGCGATTCCAATGACGCTACAGCTTCCGACGCCATtaccaaaaaagaaaattcacaAGATGGATTCAGTCATCTTTCACCTACCCATAGCTTAGATGAGAAAATGCACAAACAAAACAGAAAGATTCCCAGGCCAATACCACAACTCATACCGCTAAATTCTTCAACCCCTAACCAAAAACAAACATGTTCTGGTGAACCGCCAAACAAAAAGTTCAAGGAATCGTTACAAGCCGAAATAGTTGATGATGTATCTGGTGATAACACCCTTGTACCAGCACACCCTTCAATCAAAGAAACTGCAGGACGTAAGAAGAATGAATCATTTTTCGACAGATTAAAAGAAAGACTGCTAACAGAAACTGGTGAAGAAGGCTCGCTTATTTGCAAAAACTGTGGATTTGAAAGTAAATGTTTATCAGAACATTCTGTGCATGAGAAAAATTGTTCACCTCAAACTAACAGGATCAATGCAAATACGTCGCTTAAAAGTTTAAGTTCAACTCGATGCCAGAACTGCAGACACCGCTGTAAATCTAGTGCAGACTTGTACATCCACATGCAAACATGCGGGAAGAGCGAAAAAGCGGAAGATGAAAACACCATTAAAAATCAAGATAGTAATGACGGAGTCATTCCAATCCATGAAAAAGAGACTGAACCCCATCCAATGGAAAACGTCGTTTTCGTTTGGAATAATATTAATCAGGACTCTAATAAGTTTGATATGCCTCTAGATATAAACATAAATGATGATTGCACGCTACCAGAAGTACACAGAAGTTTCGATCCTGAGATTGTTGATGAGAACGAAAGTATGAATTTGTCACCGAGTCAAGCTATCGGAAGAAAGGTATTTAAATGTCCACATTGTCCATTTTTTTCCACAACAGCATCCAGATTTCACGTCCATATTGTGGGTCACTTAAACAAAAAACCATTTGAGTGTTCCCTCTgcaaatataaatctaattgGAGATGGGATATAACGAAGCATATAAAATTGAAATCCGCAAGGGATCCTGAACATAACGAAGCAAAAGTACTTATGACAGATGAAACTGGAAGAAGAAACTACAGTAAATATAACAAATTCTTAGCAATGCCCGTTTTAAATGACAATGGTGAAAATGAGTTTCATTACCTGGATCCTAATACTGGAGTCGATGGCACGATGGAAATGGATgaatcatttaatgatttatcAGACGTTATGAATGTACAATTTGAAATGCAACCACTTAACTTACAGACTCAACACAATGAAGATAAATACGACTATATTGATAACAGAGGTCTTAATGACCCCAAGAAACCGAAGAAAACATTatggaaatgtaaaaaatgtaacTACAAAGATCCCTCAAAAGAAGCTCTCTTAGAGCATGTCCGTGAGCACTCCAGATCGGATGGCAACCATGACGAACCAAACAAACAGCCTGTCAAGAAAGCTGAAAACAATACTCCCGATCCAGCTGACTTGGCATATCGCTGTGGGCACTGTAATCAGTTATCTAATTGGAAACATGTCATCCAGCGTCACTGCCGATTAAAACACGATGGAGTAATAAAAGTCATAACAACAGTAAAACCAAAACCCGACCCTCCAATGAATATTAACGAGATCAACATTGATACTTGCAACAAGTGTCCGTATAGAACGAGTgataaaaaactacttattgCTCACTTGCAACAGCATCAGCCCTCAGCAAATTCAATCTTTAAATGCTACTTCTGTCCATTCTTTGTGAAGGATGAACAAGAGTTAATCCAACATTTACATCTTCACGGTATCACTGACCCAGAGGATTATATCGCAAAGGCAATGGGAACCAAATCTCCTGGGCTTGAACAGCCAGCACCTGTAACTCAATCGTTTAACTCCACCAAGCGTCACAAATGCATCGAATGCCCATACGAAACTAACAGCAAGTCACAATTCATGTACCACGAACAATTTCATCGTTTACCAGCTGATACCCCATATAAATGTCCAGAATGCAACTACAGCGTATCTAAAAGACACTTGCTGCACCAGCATCTACGAGTTCACGGAATCGCAACCAAAAGAATTGAAACTGAGGCCGAATTAGAAGCATCAACATCTTCACAAAACAAGACAGATctgaaaattgaatttaatattaaccTTGATGAAATCCCATATGTTTGGGTGTCAGCGAAAAACGAGTTTCATAAAATGTACAAGTGCCGATACTGTTCATATGTTAAttctataaaatgtaaaataccaAATCATGAAAAAATTCATTGCATAGTATTTGAAAATAATGATACAACTATTTACAAGTGTTTGGAATGCAAATTCACGTGTGATAATGCCGGCAGGCTAGCCGAACATTCCAAAACACACGGCGAAATATATGGTCGCATCTATTGTCCCGTTGAATACGATGTGCCCGATGAAGAACAAATCACAAAATTGAGAAAAGTCatagaaattgaaaaatctGCAAATCCAGAAGGTTTTTCCAGGGAAGAAAGCTCTGCAAACGAAAACagagaaattaaattattatactattGTCAAAAATGCCCAGCAAGATTTTTTGATGATAGCGAACTAGAAGTTCATGAAAAATGTCATGACCCATCACTTCCGATTAAATGTAAAAGTTGTGACTTTTCAGTTACCGAAGAAAATGAATTAGCTGCACATGGTACCGTTCATACGGATGAATATCACACAAAAACGAAGATGCTTAAATTTATTCACCATTCCCACCCCTCGCACAGGCAGCCCATGCTAGAATTAGTTCACTGTCCAACGACTTCAGAGGTTACGTGGATAGCTACTGGTCCaagtaaaatagaaaatatcgAATGTCTTGTGAAAAAAATGAATGATACAAAAAACGTGCCAAAGCAATATTGTTGCAAACAATGTCCTGCGAAGTTTTTCAAAAGTTCCGCGCTAACATATCATCTGGGGCTACATGGTGGCGAAGGAGAGCATAAGTGCAAGAAATGTAACTACGCTGTGAAGAATATTGGAAATTTAGCCAAACATGAATTATTACATGACAATGACAACAAGGCTACAAGTTGTGATTACGAATCTGGTGAAGATATggactataaaaatattcctttGTCGGGCACAGATTTGTTCCAAAGAAAGACTGAGGCTCAGAAAAGAGTTCTAACCGATAAAGATAAATTAGTTAAGCCGAACGATCATTTTCCGCCTGTTCTACAAGCTGATCCTCAATTCGGATATCTAATGCACGGTAATCCTGAATTTATATATCCAACGTATCTAAAAAATGGACGTCAAAAAGAAAAGCGATATAAATGCCACAAGTGTCCTTCAGCATTTGAAAAAAGAGAACAATATAAGATCCATTTATCGTTGCACGGCTCCAAGCAAAGATATAAGTGTGAATTATGTGATTACTCTGTAAAATATTACGCCAATTACGTTCAACACATGAGAAAACATCAAATGAACGATGAAGCTCAAGCTGAAAGAAAGAAGGGAAGTAATGATTACATAGAATCTGAAAATCAAGAAGACGTAAAGCAAGACGACAGTAGTGATAATATTAAACTTGCAATAAAAACTATGCCGAAGGGGACGCCTAAAAGCGACTTCCAACAATTTTCAATTAGCGACCAGCAAACTCTCAGACTGCTGCAGCGAAGACGATCGATGAATAATTCTGGAAAAGACTTAAATACATCAGAAACTTCGCCGATCAAAGAGCGCAAAATGCACATGTGTTTGTTATGCCCCTATACTAATCAACGTCAAGATTCTTTGAGTAATCATTACAGAAGACACGGTGACGCCGATGTTCTCCACGCAGGAAGCCGCAAATGTTCTCATTGCGACCTAGTAGTGGTGCAGTCACATTTCCTTCGTGAACATCTAAAAACACACTTCAACTACCACAAGGCTCTTAATCCCGAATGTTTTGTGGCTAACGATGATGTTAGCTTTACCATTACCAAGTTAGAAGAAGGCAGTGAATCAGTTGATCTCAAATTAAACAtgcaaaacaaaagttttgcATGTAATGATGAAAAGATATTTGTGAATATTAAAACTGGAGAACTATTAGTGGAATAG
Protein Sequence: MLQQMSSPPSAQAGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGSKPTAAAAKVDAELSPPSYENIEPAERIEDLLEEVEDCEDMMMEVDEDSLERPDDIDGECDRSVDQAAPSDVSKTKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVIAEFDAASTLLPKEEEGSGDSRSSHSVSDMGLQYAERELVGCKSDSNDATASDAITKKENSQDGFSHLSPTHSLDEKMHKQNRKIPRPIPQLIPLNSSTPNQKQTCSGEPPNKKFKESLQAEIVDDVSGDNTLVPAHPSIKETAGRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCSPQTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSEKAEDENTIKNQDSNDGVIPIHEKETEPHPMENVVFVWNNINQDSNKFDMPLDININDDCTLPEVHRSFDPEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNDNGENEFHYLDPNTGVDGTMEMDESFNDLSDVMNVQFEMQPLNLQTQHNEDKYDYIDNRGLNDPKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSDGNHDEPNKQPVKKAENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSANSIFKCYFCPFFVKDEQELIQHLHLHGITDPEDYIAKAMGTKSPGLEQPAPVTQSFNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRIETEAELEASTSSQNKTDLKIEFNINLDEIPYVWVSAKNEFHKMYKCRYCSYVNSIKCKIPNHEKIHCIVFENNDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEYDVPDEEQITKLRKVIEIEKSANPEGFSREESSANENREIKLLYYCQKCPARFFDDSELEVHEKCHDPSLPIKCKSCDFSVTEENELAAHGTVHTDEYHTKTKMLKFIHHSHPSHRQPMLELVHCPTTSEVTWIATGPSKIENIECLVKKMNDTKNVPKQYCCKQCPAKFFKSSALTYHLGLHGGEGEHKCKKCNYAVKNIGNLAKHELLHDNDNKATSCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSNDYIESENQEDVKQDDSSDNIKLAIKTMPKGTPKSDFQQFSISDQQTLRLLQRRRSMNNSGKDLNTSETSPIKERKMHMCLLCPYTNQRQDSLSNHYRRHGDADVLHAGSRKCSHCDLVVVQSHFLREHLKTHFNYHKALNPECFVANDDVSFTITKLEEGSESVDLKLNMQNKSFACNDEKIFVNIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: -
80% Identity: -