Ppec011147.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- clz9
- Assembly
- GCA_036250285.1
- Location
- CM070075.1:41941853-41943639[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-08 6.7e-06 27.1 0.0 3 34 20 50 18 57 0.93
Sequence Information
- Coding Sequence
- atgcCGCGCACCTACGTCAAAAAGCTGGGAGGTAGACCGTACCTCAACTATAATAAGGAGAGCATGGAGAAAGCCATTGAAGCTGTGAAGAAAGGCATGTCCAAATCTAGAGCAAGTCTAAAGTTTAAGGTTCCAAGAACAACTTTGATCGATAAAATTAGTGGAACCCATCTTTTAAAACCGGGTCGTCCATGTATACTGACTGTCGAGGAAGAACAGATGATAGCAAAAACCCTTGGTGCAGTTAGCAACTGGGGCTTCCCCATGACGCACCAAGATATTCGCATAGTTGTGGCAAAGTTTGGATTTCATAAACGTCAGCGCTCTGCGGTGGGTAAACcggaaataaaagaatttttcgACAACATTAAAGATAACTTGGAACATGCGTTACCGGAACATGTCTATAATTACGACGAAACTAACATCACTGATGATCCTGGTGCAAAAAAAGTATTGGTGCCCAGAGGAACTAAGAGAGTCGAGCGAGTTCAAGAGCACTCTAGGACATCGATCAGTATAATGATTTGCGGAACAGCTAAGGGCATCCTGCTTCCACCCATGGTGGTCTACAAAGCCCAACACTTATACGAAAATTGGACGACAGGAGGTCCTGCGGGCACAGTATATGAGGTCACGCCAAGTGGTTGGTTTGATATGACAACATTTGAAAAATGGTTCTTCGATATTTTGATCCCTCACATAAACGCCAATACCTCCCCAGAAGAAACAAAGGTTGTGATTGGAGATAACCTTGCGTCACATTTCTCTCCTCGTGTCGTCGAAGCAGCAATAGCGAATAATATCTACATGACGCCTCTGCCACCAAATTCGACACATCTGATGCAGCCTTTAGATGTGAGTTTTTTTGCGCCCATGAAGCGAAAATGGCGAGAAGTCTTAGATACGTGGAGGAAGGAGTGTCGTCGGAAAGGAAGCATTCCAAAAGAACAATTCCCCAACTTGCTGAATCGCTTGTGGTCTCATATAGCAGAAAACGCTTCCACAAACCTGCAATCTGGCTTTAGGGCAACAGGGCTAAGCCCATTTGATCCAGAAAGAGTTTTCGCCAAACTTCCTGGCAACGAATTGAGTTCCGAGAGGGTGCTAGATTCCAGTTTACTAGAATTTCTAAAGGAATCTAGAGGATATTCTAATGCGCAGGCAACGCCTCGCAAAAGAGGAAAGAAAATAGCAACACGGCCAGGTCAACAAATGCAGATGCCAGTTGCAACAAGCACTCCATCCCGCTCGGAAGCAGCAATGGAACAAGTTGATTTACCAGAAATTGTTCATGTTGAAACAACTTCCATCACGCAAAACCCGAAGAAAAACTCAAAGGCAAGTCGCCCTAAACcactgaaaatgaaaatcgttGAACCTGATGCACCTGGACCATCGAGAAAGAGATCCACAAAAAAAGTCACTGATTCTGATTCTCTTTGCTCTGTATGCAAATGTTCTTACGCACACTATACTGTAGACAAAGACTGGATTTGTTGCATTTCGTGTTTGAAGTGGGTGTGCGGTATTTGCAATCTTGGCTCCAATGACCCTCAATATGAATGTCCTGACTGCAATTGCTGTTCCATTTGTCTAATAGAGTTTTCCGAATACACGAACCAAAAAGCTTGGATTAAGTGTGTGACTTGTGGAAAGTGGGTTTGTGGACACTGCAACGGGGGTTCCAACCAAGCGAGCTACGAATGTGCCTCATGTTTCGATGATGATTAA
- Protein Sequence
- MPRTYVKKLGGRPYLNYNKESMEKAIEAVKKGMSKSRASLKFKVPRTTLIDKISGTHLLKPGRPCILTVEEEQMIAKTLGAVSNWGFPMTHQDIRIVVAKFGFHKRQRSAVGKPEIKEFFDNIKDNLEHALPEHVYNYDETNITDDPGAKKVLVPRGTKRVERVQEHSRTSISIMICGTAKGILLPPMVVYKAQHLYENWTTGGPAGTVYEVTPSGWFDMTTFEKWFFDILIPHINANTSPEETKVVIGDNLASHFSPRVVEAAIANNIYMTPLPPNSTHLMQPLDVSFFAPMKRKWREVLDTWRKECRRKGSIPKEQFPNLLNRLWSHIAENASTNLQSGFRATGLSPFDPERVFAKLPGNELSSERVLDSSLLEFLKESRGYSNAQATPRKRGKKIATRPGQQMQMPVATSTPSRSEAAMEQVDLPEIVHVETTSITQNPKKNSKASRPKPLKMKIVEPDAPGPSRKRSTKKVTDSDSLCSVCKCSYAHYTVDKDWICCISCLKWVCGICNLGSNDPQYECPDCNCCSICLIEFSEYTNQKAWIKCVTCGKWVCGHCNGGSNQASYECASCFDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01284357;
- 90% Identity
- iTF_01284357; iTF_00329289; iTF_00329236; iTF_00329239; iTF_00329240; iTF_00329238; iTF_00327962; iTF_01284359; iTF_00327961;
- 80% Identity
- -