Basic Information

Insect: Pyrochroa serraticornis
Gene Symbol: ECU06_1150
Assembly: GCA_905333025.1
Location: HG995153.1:27632425-27634665[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0047 0.33 11.8 1.0 1 23 247 270 247 270 0.96

2 8 2.2e-05 0.0015 19.2 1.2 1 23 316 338 316 338 0.98

3 8 1.1e-05 0.00077 20.1 0.2 1 23 344 367 344 367 0.97

4 8 9.3e-06 0.00065 20.3 0.2 1 23 373 395 373 395 0.98

5 8 5.7e-07 4e-05 24.1 0.6 1 23 401 423 401 423 0.98

6 8 0.00011 0.0077 16.9 0.6 1 23 429 451 429 451 0.98

7 8 2.1e-06 0.00015 22.3 1.9 1 23 457 479 457 479 0.98

8 8 3.3e-06 0.00023 21.8 1.0 1 21 485 505 485 506 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0047	0.33	11.8	1.0	1	23	247	270	247	270	0.96
2	8	2.2e-05	0.0015	19.2	1.2	1	23	316	338	316	338	0.98
3	8	1.1e-05	0.00077	20.1	0.2	1	23	344	367	344	367	0.97
4	8	9.3e-06	0.00065	20.3	0.2	1	23	373	395	373	395	0.98
5	8	5.7e-07	4e-05	24.1	0.6	1	23	401	423	401	423	0.98
6	8	0.00011	0.0077	16.9	0.6	1	23	429	451	429	451	0.98
7	8	2.1e-06	0.00015	22.3	1.9	1	23	457	479	457	479	0.98
8	8	3.3e-06	0.00023	21.8	1.0	1	21	485	505	485	506	0.96

Sequence Information

Coding Sequence: ATGAATAACGAACAAGTGGAGGGCGCTGGCCATTTGGAAATTGTCAACATAAACAGTGTTTGCCGATTATGTGCTAACCAAAAGGACAAACTCATCAGTATTTACGGAGACGAAGGGGTAGCTCACGATTTGGCCAACAAAATCAACCTACATTTACCGTTTAGAGTCAATGACAATGACGAGCTGCCCTTGCAATGTTGTTGGGGCTGCGTTTCGACATTACTTGCCTGGCACGACCTTGTGATCACCAGCGTAGAAGCTGAGCAAAGGTTCCGAACAGGTCAGCTGATCGGTGGAAAACACATGGTTCAGCACATCACTTTCGAAGCAGCCGAAGACATCACCAACGACCAGAATGACACGATGGAACTGGAGCCGATGGCCACAAGTCTGAATGATTTCTGCCAATCCGAGGCGATTTCTTCCACGCCAGAAGACGACAAAAAACCTATCAAACAATACAAGAACAAGAAGAAACCGAACTTGATGCCGTTCTACCCCCAAGAACCTACCAATTCCTTAGAAAACTACATATCAGACATCGAACAACATTTTATAGTCGACACAAATCTCGAAAACAACGCCGACAGTCTCGGCGAATACAAAATTGACATAGAAGACGCCAATATGTTAGCGAAAGAAGAGAAGAAACTATGCGAAGATATTGTAACCGAAGATAATTCGCGAGGTGTTTCCGGTAACGACAGCGATGAGTCGAAAGAAGAGGAAGAAAAGGTTTATGCTTGTCCGTATTGTTCTGCCGTTTTTGTTTTGAAATGTGACGTCACTAATCATATTTGTGTCGATCATCCGGGTAAAGAATGTTTGTCGCCGATAGAACAACAATTTCCTGATCAAAAACTCAAAACTGAACGCAGAAAAAACAACAAGATCGACCAAGACGTTATTAATGCCGCCAAAGTTGTGGTTGACGGCCGTATTTACTACAATTGTAAAGAATGCGGGAAAAGTCTTCATTCACCATACACTTACGTTTGGCATATGCGGATACATACGGGAGAACGTCCATACGTTTGCGATTTATGCGGCAAACAATTTAGGGTGTCGCAAGGGTTAGTTCGTCATCTACGAGAGACGCATCAAGGAATCAAGAAATTTCCTTGCGACCTCTGCGGACGAATGTTTGCAACACGGAGAAATGTCGAGGAGCATCGCAGGATTCACACGAATGAGCGACCGTACATTTGCGATTTGTGCGGTAAAGCTTTCAAACAGAAAGCTTCGCTTTTTGTGCACAAGAGGTCGCATAAAAATTATTTTCCTTTCAAGTGCAGCTATTGTAATCAAGGATTTCGAACTAGACCACCGCTACTCGTTCATATTACCCGTCATACTGGAGAAAAGCCATACAAGTGTGACACGTGCGGCAGAAGTTTTAGGATTAAATACGAACTTAAAAGACACAAACTCATCCATTCGGACGAGAAACCGTTTGTTTGTTCGTTATGTGGACTCAGTTTTCGACAAAAACGGTATCTGAGAAACCATATGAAGTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGTAG
Protein Sequence: MNNEQVEGAGHLEIVNINSVCRLCANQKDKLISIYGDEGVAHDLANKINLHLPFRVNDNDELPLQCCWGCVSTLLAWHDLVITSVEAEQRFRTGQLIGGKHMVQHITFEAAEDITNDQNDTMELEPMATSLNDFCQSEAISSTPEDDKKPIKQYKNKKKPNLMPFYPQEPTNSLENYISDIEQHFIVDTNLENNADSLGEYKIDIEDANMLAKEEKKLCEDIVTEDNSRGVSGNDSDESKEEEEKVYACPYCSAVFVLKCDVTNHICVDHPGKECLSPIEQQFPDQKLKTERRKNNKIDQDVINAAKVVVDGRIYYNCKECGKSLHSPYTYVWHMRIHTGERPYVCDLCGKQFRVSQGLVRHLRETHQGIKKFPCDLCGRMFATRRNVEEHRRIHTNERPYICDLCGKAFKQKASLFVHKRSHKNYFPFKCSYCNQGFRTRPPLLVHITRHTGEKPYKCDTCGRSFRIKYELKRHKLIHSDEKPFVCSLCGLSFRQKRYLRNHMKSXXXXXXXXXXXXW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330041;
90% Identity: iTF_01283928;
80% Identity: iTF_01283928;