Pser009263.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrochroa serraticornis
Gene Symbol
Hr39
Assembly
GCA_905333025.1
Location
HG995152.1:25104476-25112949[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.087 9.8e+02 -0.8 2.3 47 102 202 261 123 311 0.58
2 4 2.4e-08 0.00027 20.8 0.0 1 24 388 411 388 422 0.86
3 4 0.0046 52 3.4 0.0 55 116 416 478 410 500 0.72
4 4 2.9e-73 3.3e-69 234.6 0.1 205 408 519 717 493 717 0.96

Sequence Information

Coding Sequence
ATGGCCGCAGACATGAGGTCTCCCAACGTGTCAGTAACTTCCATTAACATGGAGCCCCCCTATCCGTCGACGCCGATTACCAACTGCGAATTGCCGGGTGGGGAGCCTCAACGTACCAGGAGCGCCCCACATCCTGGACTTCTCACCAACAGTGAAATACTAGACAGTTCCGATGCCGAAGTGGCCCAAATAGATTTTCAATGTGCAGTGAATATGAGGCACAAAACGAAAAGGGAGGGTGCCGACATACCCAGGCCAATGTCCTGGGAGGGAGAACTGTCGGATCATGAGAGGGATATGTGCGTCGACGATGATAGCGGATCTCAGGTGCCCGAGAACTTATCCCTTTCGCAACCCAAACTAAACTCGACTGTGGGCCTGGACTCGAAGGAGAGTCCTATTTTGAGGTTGAAACAGCCTCCGATGGGCAACTATTCGTTACACAGCACCCCCAGTAATTCACCTTTGTTGAGCCAACGTCACCCCGTTACCGGTGTACCTATCATCAGTCATAAAGACATAATGCACAAGGCCCTCAACGTACCACCGACGCCCAGTCCCGATTCCGCCATCCATTCGGCTTACAGTGTATTCAGTTCGCCAAATCAAAGCCCTTTAACACAAAGACATATCACGCTAACGCCGAATTTGAGCAGGAACAATAGTGACGCCTCGCACTCGAGCTGTTGTAGTTATTCGAGTGTTTCGGTTTCGGTCTCGCCCACGCAACAGTTCTCGCCCACTCACAGTCCTATCCAGGGCCGCCATATGCACAGTATTCACAGTAGTCCTCTACATCACAACGTTCTGTACCGTAGTCTGCAGGAGGACCCCAGCGTACAGTACAGCGCTGAACACGATGGCCTCGACGAGGTCGAAGATAAGACTGGCTTAGTTCATACGTCCCTGCCCGCCCAACCAGGCATCTCCCGACAACAACTCATCAACAGCCCTTGTCCCATCTGCGGTGATAAAATATCTGGTTTCCATTACGGCATCTTCAGTTGCGAATCATGCAAAGGATTTTTTAAACGCACCGTGCAAAACAGAAAAAATTACGTTTGTTTGCGAGGCGCCGCCTGTCCAGTCACAGTCGCCACCCGAAAAAAATGCCCCGCTTGCCGATTCGATAAATGTTTACAATGTGGAATGAAATTAGAAGCTATTCGAGAAGATCGGACGCGAGGTGGACGTTCGACTTATCAATGCTCGTATTCGTTACCGCCTTCGTTGAGTAACCATTCGGAATTGAGAGCCAGTTCTACGGATTTAAGACAAAATGTAGGAGACGCCCATCATGGGTTGACTGTTAAATTAGAACCTGCGGATTCCGCAATGTCGCATCATAAGCGAAGCTCTATGCCAGGATCGAAGGGTGTCCCAGCATTATTGCAAGAAATAATGGATGTGGAGCACCTGTGGCATTACAACGAAATGGAACTGAATAAATTAAGTACTGAAGGCCATTTAGGTAAAGAGGGAACGAGCGGAGCCGTCCATAACCTCTCAAATCACCCCCTCCTAGCTGGCACTGCGCTAGCAGGTTCGACTGACACTAATCCCGATTTTGTTGCCAATTTGTGCAATATAGCCGACCGTCGTCTGTACAAAATAGTAAAATGGTGCAAGAGTCTGCCGCTATTCAAGAACATATCCATCGACGATCAGATTTGTCTGCTTATCAATTCTTGGTGCGAATTACTTCTTTTCTCCTGCTGTTTTCGATCTATGTCGACTCCAGGCGAAATCCGAGTGTCTCTCGGTAAAAGTATTACTCTGAACCAAGCACGAGAAATGGGGATGCAAGCCTGTATCGAAAGGATGTTAAATTTTACAGACCAACTGCGAAGGTTAAAAGTTGATCAGTACGAATACGTAGCTATGAAAGTTATAGTTTTACTCACATCCGACACTTCGGAATTGAGAGACGCCGAAAAAGTCAGGGCGTCGCAGGAGAAGGCGTTAAAAGCTTTGCAAGACTACACTTTGATCCATTATCCGGACAGTCCTGCTAAATTTGGGGAATTACTCCTTCGCATTCCTGAATTACAACGAACTTGCCAGGTCGGAAAAGAGATGTTGACTATAAAATCAAAGGACGGGGACGGACCTAGCTTCAATCTTCTCATGGAGCTGCTCCGCGGGAATCACTAG
Protein Sequence
MAADMRSPNVSVTSINMEPPYPSTPITNCELPGGEPQRTRSAPHPGLLTNSEILDSSDAEVAQIDFQCAVNMRHKTKREGADIPRPMSWEGELSDHERDMCVDDDSGSQVPENLSLSQPKLNSTVGLDSKESPILRLKQPPMGNYSLHSTPSNSPLLSQRHPVTGVPIISHKDIMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHSIHSSPLHHNVLYRSLQEDPSVQYSAEHDGLDEVEDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLSNHSELRASSTDLRQNVGDAHHGLTVKLEPADSAMSHHKRSSMPGSKGVPALLQEIMDVEHLWHYNEMELNKLSTEGHLGKEGTSGAVHNLSNHPLLAGTALAGSTDTNPDFVANLCNIADRRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLNQAREMGMQACIERMLNFTDQLRRLKVDQYEYVAMKVIVLLTSDTSELRDAEKVRASQEKALKALQDYTLIHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00753059;
90% Identity
iTF_01283426;
80% Identity
iTF_01283426;