Basic Information

Gene Symbol
lilli
Assembly
GCA_905333025.1
Location
HG995157.1:4634477-4662384[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.5e-10 3.3e-06 27.0 0.3 4 105 75 175 73 202 0.72
2 6 2e-12 4.5e-08 33.1 18.9 349 513 293 474 280 475 0.61
3 6 1 2.2e+04 -9.0 16.6 404 482 522 605 493 631 0.43
4 6 0.033 7.5e+02 -0.6 6.8 436 472 694 734 675 741 0.56
5 6 0.047 1.1e+03 -1.1 24.9 74 225 1045 1184 1024 1229 0.46
6 6 0.077 1.7e+03 -1.8 0.2 186 215 1330 1362 1270 1415 0.51

Sequence Information

Coding Sequence
ATGTGCCCAACAGATGTTCTTACGAACGCTAGCACACCTGCTGCCAAACGTCTCGTTCGACCCCAAAGACATTACAGGTCACCCAATTCCCGAATTTCACCCCCAAAGTGGCGTCTGGAAACTTCTATAACCCAAAACAGTTCTGCTATCATTTCGATTTTCTCGACTATTCATCAATTCTCCAATTACTTCATCGTCTTAAACTTGCGGTGTCTCCGCGTGGAGAGAGACCGCCTGCGCGAGCGGGAGAGGCAGGCCCGGGCCCAGATGTCTTCGCAAGTCGACGAACAGGAGAGCTGCCTTTTCGGAGCACCCGTCAGGGTGAACCCGTCCTCCGTAGACCCCGTCACGCAGCAGATCCAGAGCAAGTTAGGAAATTTTCAAAAGCTCAAGTACTTCCTTGACCAGAAGGAACTGATCGGGGTTGATGGTGTACCGCCCAGTCCGGGGGTGCCGTCGTCCAGACAGCATCATCCATTCCCCAACTTATCAGGGCCGTCCTCCAGGCTGCAGCCGTCGACAGAATCTCGTCCGGAATTCAAGAAACCTCACCATCAAAATATCCATCCGCACCAAAGAGGCGGCTACGTGAAGCCGGCCGATGGGAAGCCACCTTACGAGGGTAGAGGCGGCTATCCCGGACAACCGGTGAAACATGGGAGCGGTATCACGAATCACAGGTCCAATGGGATACTACCCGCCAAGGGACCACCTCAATCTTCGCCCGGTTCCGCGTCCAATCTGCAATCATCGAGCTCTTCAGGACGGGTGCACGGTAGCGGCACGTCACGCAATCCTCGCATTCCCTATGACCAGACCCAAGGACCTACGGCCGGCCCAAGGGAACCCATGCCTTCCGCCACTCCTAATCCCGACATGGAGAACATTTTCAAGGAAATGATTGAAGTACGAATGCCTCTCACCGCCATCGCAGCTACTCCCAGGATAGAACAAGATAATAAGTTCACCTTCAATCCTGTTCTCGCCAAGTTGACCGAATCGACACCGGAGGCGCCGTCTACGAACACGCCAAAGAAACGCGAGAAGGTGCCAGCCGCGAGGCCGCCAACTGACTTAAGAGATGATCTCAATTTATCGGATGACAGCGATGACGAAAAGCGAGAATCTCTACACTCTTCCAAGTTACCAGTAGAAAAGATGGTGTCTCCGTTGGCAGCGACCCCGGCGGTCAGCTTGTACCCCAAGATGGATTACCCGCCAGAGCCGGCTCCGGCCGCCAGTTCCTCCAGCGATTCCTGTTCGGATTCGGGCTCCGAAAGTGATTCGAGCAGCGAGGATTCTATGGACGAGAACGTGTCGTCGTCTAACGCAACGAAACCAATTGTACCTGCAGAAACGGTTCCGGCATCGCCTCAACCCGAAGAAAAAGACAAGAAACGTTGGAACCTCGGCTCGTACCTCGGCCTCGACCAGAACAACGTCAAAGCGGATTCGGTACAATCGCCGAAAGTACAATCCTCACCTTTAACTTCCAGCATGTTGCCTTTGGCCGATTTCAAAAACAAACGGACTACTGAAGAATCGGACGCCAGCGACTCAACAAAGGATTTGGAAAGTGCTTTAGCTGAAGCGATGACAACTAAGTCAATGGCGTTGTTGTCGAGTTTTTCGGATTCGGACGATAGCGAGAACGAAAAGCGTGCTAAGAGACGTAAAAAGACCATCCAACCACCAGTTACCAAAAAATTTGATAGTGAAAGTGATGATGGACGGACGAGTAAAGTATCGAAACCAGTGAGTCGAGTGAGCCCGCGGACAAAATCTGTGGATTCCTTTAGTGAATCGGAAACGGATATGACATTTAATAGTAAAATCAGTGCCAAACCCCCCAAGAGATTGTTATCGCCTTTACCTAGTAAAACTCCCGAGAAAGTAGTGAAACCGAAAGCCAGTAGAGGACGTCCTAGAAAAATCAAACCGGCACCGGCTAGCGGTTCAGACACCGAAGTTCGGGTCGGTGCGAAAAAACGAGGGAGACCACCTTTAGCGAAAAACCGACGATCGGCTAGCGGTTCCGACGTTGAGGTGACGACACCAGTCAAAAAACGCGGCAGACCCCCGAAACCGCGACCATCCCCACCCAGCAGTTCGGACGAGGAAGAAACTTTCGAGAAACCACCTTCTAGACGAAGAACAATTTCGAAAGTGGACGGCAGTAGCAGTTCCGATTCGGATTCGAGTCCTCGCTTCAAAAATGATATCAAAGACAAGTATAGCAGCACAGCGAAAAAAAGCCATAAGCACAAATCCGAGGATAAAATCAAAAAGACCAAAAACGATTCCGACGAGGAATGGGGCAAACCGAAAAATCGAAAGAACCGTCTCGAATCGCCACGCAAATTGGATTCGCCGAAAAAGAAGGAGACTACAGCTCCTTACCGACGTAAAGGTCGGACGTCTACGCAACAATTAAGCGCTGCCATAGTGCCAACTTCCGATTCTAGCGATAGCGAGGTAGACGCGAAGAAAAATAAAGTGAAGGGGCACAAAAAGAGAAGTCCAAGTTCGGAAAGTGATTCGCATGTAGCGAGAAGAAGTCGCTCTTCTGACAGCGATAACTTACGAAGGGTTAAATCGACGGATGGCCTCAACAAAGGCGACACCGCGATCAAGGTTGACGAAAGCAAGTCGATACAAGACAAAAAGAAGAGCGACACGTTACGGAAGCTGTTCACGCCAAAGAGGGATTCCGAAGGGGGAAAGGGAGGCGGCAAAGGCGGAGGCAAAGGTGGAAAAGGTGGTAAAGGTAAAGGAGGTGTCGATGTGATTTTCGTGGACGGCGGCTACGAGCGCAGCAGTTCTTCAGTGGAAGACGATGCGATACCGAGCATATCAAATCCTACTCTGTTGTCCCCGATACCAAATAAAGAAATCAAAAAGGACCCGCCACGATTACCGGTATCGTCATGCACGGAACCAATCAAACTCTCTAAGACTGATATTTCCGATAAGGAAAACTCTAAAAAACCGACAACGATTGCGCCACCCGTCGAAAAGCGTTCATTTAAACTAAATATCGGTTTAAACCGCATCGACATCAACCGCGTACCGAATTTGAAATCGAAAATGGAATCCATACGTCATCCCTATTTGCGTGAATCGGAAAAAATGAAAGCACCCAACAGGACGAGTTCGGAAAAGGTGCCGGAATCGAGAGATTCGAAACCGTTTAAAGAAAGCGACGAGAACAAAAAATCGTGGAAGAGCAGCGATAAAGACGCTGCAGCGGCGACGGCGCCCCCTGAAGTCGTCGAGGTGAAGCACAAGTCGAAGAAGCGGAAGAGACGTAACAGTGCCAGTTCGATATCCTCATTGTCGACTGTCAGCAATTTGTCTCACGGTAGCAAAAAAGCGGAAAGGAAGAAAGACCGGGACAATCATAAATCGAAAAGGCGGAAAGACGAATCCGAAGTAACCGCCAGATCTCAAAGTGACCATATGAATTTGGCCAACGCGCCCCCGACCAATCACGACCGGGAAGCTAAAACACACTCGTCCGTAGACAAGAACGCCGCGGTCAAACAGCAGAATCCTAGGGAGTATTTTTCGTACTTCGAAAAACCCGACGAGACCCTCGAGTGCGAAGAAAGGGCTCAAAGTCAGTACCTGAACGATGCGACGAGACTAAAGCATTTGGCCGACAAAGAGACTGATACCACTAAACAGTGCATGCTCTATTTGGAGGCTGTACTCTACTTTTTACTAACCGGCAACGCTATGGAAAACACTCGAGTCACCGAAAATTCCTGCTTTACCATGTACAAAGACACCCTTGCGTTAATAAGGTATATTACCTCAAAGTTCCGAAGTCAACACGACGCATCCCCGAAACAAAACAAACTAGCCGTGTTGAGTTACCGGTGCCAAGCCCTTCTCTATTACAAGCTGTTCAAAATGAGGAAACACGATTCGAAAGACAACCAAAAACAGATCAACGATTTCTTCACTAATAGAGCTGCAGCCATGCCGCAGGATCAGCAACCCCAACAGGGCCAAGGAACGCCTTCTCCATTGTCGCCTACTCCTTCCCCGGCCGGTTCAGTGGGTTCGGTAGGGAGTCAATCTTCGGGTTACAGTAGCGGAGAGTTGGCTGCGAGAGGGAACGCGCCTGTGCCTGCACCCGCGACGCATGCACCGAGTACGGGGGGTCACATATGGATACCGATTACCGTTTACAATGCCGTCTACAAGCAGAACCAGAATTTCACATATCTGCTCTCCAGTCAGGATCTGTGGGACACAGCTGATTCCCTTGTTATGAGAGGCAAACACACAGACTTTTTTATCGAGCTGGACAGGACCTGCAAACCTCTAACGATGCACAGTTCACTAATCGACTTGGTGAGGTACATTCGGGAAGGTATCAAGCGTCTGAACGAGAGTTAG
Protein Sequence
MCPTDVLTNASTPAAKRLVRPQRHYRSPNSRISPPKWRLETSITQNSSAIISIFSTIHQFSNYFIVLNLRCLRVERDRLRERERQARAQMSSQVDEQESCLFGAPVRVNPSSVDPVTQQIQSKLGNFQKLKYFLDQKELIGVDGVPPSPGVPSSRQHHPFPNLSGPSSRLQPSTESRPEFKKPHHQNIHPHQRGGYVKPADGKPPYEGRGGYPGQPVKHGSGITNHRSNGILPAKGPPQSSPGSASNLQSSSSSGRVHGSGTSRNPRIPYDQTQGPTAGPREPMPSATPNPDMENIFKEMIEVRMPLTAIAATPRIEQDNKFTFNPVLAKLTESTPEAPSTNTPKKREKVPAARPPTDLRDDLNLSDDSDDEKRESLHSSKLPVEKMVSPLAATPAVSLYPKMDYPPEPAPAASSSSDSCSDSGSESDSSSEDSMDENVSSSNATKPIVPAETVPASPQPEEKDKKRWNLGSYLGLDQNNVKADSVQSPKVQSSPLTSSMLPLADFKNKRTTEESDASDSTKDLESALAEAMTTKSMALLSSFSDSDDSENEKRAKRRKKTIQPPVTKKFDSESDDGRTSKVSKPVSRVSPRTKSVDSFSESETDMTFNSKISAKPPKRLLSPLPSKTPEKVVKPKASRGRPRKIKPAPASGSDTEVRVGAKKRGRPPLAKNRRSASGSDVEVTTPVKKRGRPPKPRPSPPSSSDEEETFEKPPSRRRTISKVDGSSSSDSDSSPRFKNDIKDKYSSTAKKSHKHKSEDKIKKTKNDSDEEWGKPKNRKNRLESPRKLDSPKKKETTAPYRRKGRTSTQQLSAAIVPTSDSSDSEVDAKKNKVKGHKKRSPSSESDSHVARRSRSSDSDNLRRVKSTDGLNKGDTAIKVDESKSIQDKKKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVDVIFVDGGYERSSSSVEDDAIPSISNPTLLSPIPNKEIKKDPPRLPVSSCTEPIKLSKTDISDKENSKKPTTIAPPVEKRSFKLNIGLNRIDINRVPNLKSKMESIRHPYLRESEKMKAPNRTSSEKVPESRDSKPFKESDENKKSWKSSDKDAAAATAPPEVVEVKHKSKKRKRRNSASSISSLSTVSNLSHGSKKAERKKDRDNHKSKRRKDESEVTARSQSDHMNLANAPPTNHDREAKTHSSVDKNAAVKQQNPREYFSYFEKPDETLECEERAQSQYLNDATRLKHLADKETDTTKQCMLYLEAVLYFLLTGNAMENTRVTENSCFTMYKDTLALIRYITSKFRSQHDASPKQNKLAVLSYRCQALLYYKLFKMRKHDSKDNQKQINDFFTNRAAAMPQDQQPQQGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELAARGNAPVPAPATHAPSTGGHIWIPITVYNAVYKQNQNFTYLLSSQDLWDTADSLVMRGKHTDFFIELDRTCKPLTMHSSLIDLVRYIREGIKRLNES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-