Pser008496.1
Basic Information
- Insect
- Pyrochroa serraticornis
- Gene Symbol
- Rel
- Assembly
- GCA_905333025.1
- Location
- HG995152.1:16957667-16964681[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-38 1.3e-34 119.9 0.5 1 168 75 265 75 266 0.90 2 2 0.033 1.8e+02 2.3 0.2 103 147 760 803 738 816 0.81
Sequence Information
- Coding Sequence
- ATGTTAGTGGAAAAAGACGATTTAACCCTTTACCAACTACAACAAGTCGACATGAGTAACTATCCGTATAGTTTTACACCTCCTTCAAGCAATGAAGATTCACCTCAACCCATGTGCAATCCTTCCCCAACTTGTTTTTCGCCATCATCATCAGATTCAAATAACGTGATAATATCATCATATGGTTCGAATTATGAACCCAATTCTTCTACGAGTCCTTATATGCGAATAATTGAACAACCTATTGACCGGTTTCGTTTTCGTTACAAATCAGAAATGACAGGCACACACGGAAGTTTATGTGGAATGAATTCGGATAAATCGCGGAAACAAACATATCCAACCATTGAGCTATGCAATTTTGATAAACCGGCAATAGTTCGTTGTTCCATTTACCAACAGAACGCGAAAGATGACAATATGCCTCATGCACATCGATTGATTAAGAAGCAAGGTAAAGATGAAGTGGATGATCCTCATAGTAATAATGTTTCAATTGAGAAAGGTTATGTCAATGTGTTTCACAGTATGGGTATTATACATACTGCAAAAAAGAATATAGTGCCGGAATTGGTGCGAAAGAAAACTAAGTTGAAGCAAGAAGAGATCGCCCGACTTGAAGGAGCATATCGAGAATTGACCACAAAAGAGGAAGTTGAGATTAAAGGATTGGCTGAATCAGAGAGTAAATCCATTAATCTGAACGTTGTTTGCTTACGTTTTGATGCGTTTTACGTGTCCAATGGCATTCTATTTCCCATTTGCCCTCCAATTTTCTCCCATGGGATCAATAACTTGAAAAGCGCCTTAACTGGCGAATTGAAAATAGTTCGCATGGACCATTGCACTAGTCCCACTAAAGGGGGACGAGAAATTTTTATCCTTGTCGAAAGAGTTACCAAAAAAAACATCAAAGTTCGTTTTTATGAACTTGACGATTCGGATAACGTTCTGTGGGAAGATTACGGAAAGTTTAGTGATCTTGATGTCCATCATCAATACGCAATTGTTTTTAAGACTCCTCCGTATCGAGATTTGAACATCACTAGTTCTGTAAAAGTTTATATTGAGCTAGAAAGACCGTCAGATCACGCTAAAAGTGAACCAAAAGAATTTACCTATGTTGCTTCAATTGATGCTTATAAACCAGGTGCAAAGAGGTTGAGACCGAATTATAGCAGCTCAAGCTATGATAGTTCTTTACCCAGTGATGAACTTCCTGTGCCTATCAACAACTTGTGCATTCAAACCGCAACGAATTCCATGCTTTTGGAGAATGCCGATTATCAAGTTAACAGTGCCGATTTTCAGCAGGCTTTAACTAACATCAATTCTGACGAATTCCAACGGGCTTTTCACGAATTTTGGCCGGAATACCAATCTGTTACCACTGACGCACCTGTTGTGAAATATGGTAACAACGACAGAAGCAAGTTTGGGTTCAGCTTTCCAGCTAGTCGAACCACAACAACCAACAAAGATTGGTCTACTAGCTCGCGTAGCAAATCCGTGGCGCAAAGGTACATCAGTCCTGAAGAAACTCGCGTGGGCAAAACCGCTTTGCAAGAACTTCGAAGTTTTATCAAAACTAAACCGACGGAGGAGAAAGTTATTGTGATGCTTCATCATTATTTGAGCCAAAATAACAAAACTAACGCCTTACATATTTCAGTCAAGCAAAACGACGTTGAATCAGTCTTATTTTTATTGAAACTGATTCACGTGTGGAAGCAGCATCAGTTATTAAATATCAAAAGTGATGAAGGTGAAACTGCTTTGCACATTGCCACTTACTGCAACAACGAGGAAGTCATTAATATTTTGATTCCGTGTAAAGCTGACGTTTCTGTAGGTGACAGCGAACTTAACACCGCCGTCCATATTGGGGTCATGAGCAACGCTTCTAGCGAAATTTTAGAAAAGTTGTTGTCAACTGATAATATTGCTGATTTTATTGATAACGAAAATAACGACGGCAACACTGCGTTAAATCTTGCTATCGAAAATAATAATTTGCGAGCATTGAAAATATTGTGTAATCGTGGCGCTGACATAAACAAAAGACACAAGAAAAGCGGCTTCACTCCAATGCGATTCGCTGTTGAAAAACAACACATTGAAATTCTCAAATACGTGTTGCAGCATTCAGAAATTGATCCTTTAGTAGGTGATTTCCAAGGAGTTAATCCGTTGACCGCGGCAATGAAGAAGAATGAGGAAGTTATGGAATTAGTTTCAGAATATATGAGAAATAACGATTATTCTGACGTGGAAGTAAAGAACGAAGTTGAGGATTTGTCAGAAGAAGAAGAAGAAATTGAAGAGAAATTCAGTGTGAAAATGGAACAGATTGCGCAAGAGGACCTTTACGATATGTACAGTACCGTAACATGTTTTACTCCTGATTGTTTAAATCAAGTGTCAAAGATTTTGGATCAATCGGGAAATTGGCAAAGTTTAGCTGAACTTTTAGATTTAGGTCACTTGATGAGGTCGAATTTGTATGACACTAAAAGTAGTCCTTCAAAATTTTTGTTGAAATTAGCGCTTGAGACAAATGGAGATACGATACTGCAAATTCGTAATTTTCTGGAAAATCTGGATGAGACGCGGGCTGTTGAAATTATTGATGATATGGTGAAAAGCCAATTCCTGTGA
- Protein Sequence
- MLVEKDDLTLYQLQQVDMSNYPYSFTPPSSNEDSPQPMCNPSPTCFSPSSSDSNNVIISSYGSNYEPNSSTSPYMRIIEQPIDRFRFRYKSEMTGTHGSLCGMNSDKSRKQTYPTIELCNFDKPAIVRCSIYQQNAKDDNMPHAHRLIKKQGKDEVDDPHSNNVSIEKGYVNVFHSMGIIHTAKKNIVPELVRKKTKLKQEEIARLEGAYRELTTKEEVEIKGLAESESKSINLNVVCLRFDAFYVSNGILFPICPPIFSHGINNLKSALTGELKIVRMDHCTSPTKGGREIFILVERVTKKNIKVRFYELDDSDNVLWEDYGKFSDLDVHHQYAIVFKTPPYRDLNITSSVKVYIELERPSDHAKSEPKEFTYVASIDAYKPGAKRLRPNYSSSSYDSSLPSDELPVPINNLCIQTATNSMLLENADYQVNSADFQQALTNINSDEFQRAFHEFWPEYQSVTTDAPVVKYGNNDRSKFGFSFPASRTTTTNKDWSTSSRSKSVAQRYISPEETRVGKTALQELRSFIKTKPTEEKVIVMLHHYLSQNNKTNALHISVKQNDVESVLFLLKLIHVWKQHQLLNIKSDEGETALHIATYCNNEEVINILIPCKADVSVGDSELNTAVHIGVMSNASSEILEKLLSTDNIADFIDNENNDGNTALNLAIENNNLRALKILCNRGADINKRHKKSGFTPMRFAVEKQHIEILKYVLQHSEIDPLVGDFQGVNPLTAAMKKNEEVMELVSEYMRNNDYSDVEVKNEVEDLSEEEEEIEEKFSVKMEQIAQEDLYDMYSTVTCFTPDCLNQVSKILDQSGNWQSLAELLDLGHLMRSNLYDTKSSPSKFLLKLALETNGDTILQIRNFLENLDETRAVEIIDDMVKSQFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01329556;
- 90% Identity
- -
- 80% Identity
- -