Ppur010805.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001643.1:31484626-31505270[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.029 5 9.6 3.1 2 23 33 54 32 54 0.96 2 14 0.00034 0.057 15.7 3.3 1 23 92 115 92 115 0.96 3 14 0.00014 0.025 16.9 4.1 1 23 117 139 117 139 0.98 4 14 2.2 3.8e+02 3.7 0.0 1 11 174 184 174 196 0.76 5 14 0.16 28 7.3 1.3 2 20 227 245 226 249 0.84 6 14 5 8.6e+02 2.6 1.9 3 15 258 270 256 278 0.77 7 14 3e-05 0.0052 19.0 0.5 1 23 284 307 284 307 0.97 8 14 0.0085 1.4 11.3 0.3 1 23 318 341 318 341 0.96 9 14 0.00014 0.024 16.9 0.0 2 23 346 369 345 369 0.95 10 14 0.081 14 8.2 0.2 3 20 375 392 375 395 0.92 11 14 0.00022 0.037 16.3 0.2 1 23 400 422 400 422 0.95 12 14 0.00019 0.032 16.5 4.8 1 23 428 450 428 450 0.97 13 14 5.4e-05 0.0092 18.2 1.5 1 23 456 478 456 478 0.96 14 14 1.9e-07 3.3e-05 25.9 0.5 1 23 484 507 484 507 0.97
Sequence Information
- Coding Sequence
- ATGGCTGCTCTTTCAAAGTGGGTCCCTATAGGGGCAGCCACAGACCAGCCTCAGCCACATCTAAAACTCACTACCATTGATAAAATTGGTGGTATTTACTGCCATATCTGTCACTCAACCTTTGGAAACAAAAAGGATTATGATGCACATTACATAAAGCATGAAACTGGAAGTAAAGAAATCACATATACATGTGTAGTTTGCCGTAAAGATATAGTGGGCTATCCCAGCTTCAGAGGACATTGTTACACAACCCATGTCATGAAAGATAAATTCAAATGCAACCACTGCGACAAGCTATTTTCAAAGCAAACTGCCCTCCTGAGCCATTTTGAAACTATGCATCAGTTTAAATGTTCAACTTGTCATAATAAATTTAAATCTCAAAAAGAACTTACAATGCATATGATAATTCACAAAAAAGAGTTTACACCACCATACAACTGCCAAGTTTGCAACAAGCTAATTGAAGATACCAACGATTGCGAGCAACATTTGGAGGATCACAGCACCACATCCTACTCTTGCCCTATTTGTGATGAAGGTATAAGCAACATACAAGACGGGGCTAATCATCTCGCTGAGCATTTTGGTGAAGTACTTACTAATAATGATGAATCAGATTCCGAAGAAAACGAATTTGCTAATGATAGCTCAATAGATCTTCTCGGTGGTATTTACTGTACACATTGCAACAAAAATTTCAAAGCCAGACCGGAGTTTGACACACACTTTGTACTGGAACACGAAGATCAGAGCTTGACCTATGGGTGTAACATCTGTGGCAAGGAGTATGAGAAATACCTTTTCTTTGCAAACCACTGCTACAACCACTGTACCAAAGATAAGTTCAAGTGCGAAGTGTGCTCCAAACGTTTTCCGCGCCTCTCTCTCCTGGTGATCCACACTGAGACATATCACTCGGGTGCCCGAGGGGATGCAGCGTACCCTTTCACATGCCAGCAGTGTGGCCTCGGGCTTAGTTCTGCAAGGCGCCTCAGAGATCACAGGCGGGCTGAGCATAACAGTTCCAGTGAGTGTCCGGAGCAGGGTTGTGGGAAGATCTTCAACACGCCAAAAGAGCTGGTCCTCCACCTCAAAGAACACAGCGGTGGTGCGTGGTGCCGCCGCTGCGGGCTTCGCTTCACGTCTCCCTCCGCCGCGTTACGGCATCTGCCGGTTCACCGCACCACCCTGTATGCCTGTCCGGTGTGCGGCAGGACCTATGGCGAGAAGTACCTGCTCATGAAGCACGTGACGCAGCACTTCTCATCTGTGCTGCACGTGTGCAAGATCTGCGGCCGCGTGTACTCGCACCGGCACCGCCTCGCGCAGCATCTCAAGGTGCACGCGGAGGCCAAGgCACACGCGTGCGACACGTGCGGCAAAGGCTTCGCCAAGCGCTTCCTGCTCAAGCAGCACCAGAACATCCACGCGGACGCGCGCCCCTACCGCTGCCCCAACTGCCCCAAGACCTTCGCCAGCGCGCCCAACTTCAAACGACACATGAAGAACATACACAAAGTCACACGCTTAGACATCAAAGTGATCATCGACGAAGCGAACAAAACCGATGTgaacaaacaagataataatGTCACTCCGTCGAGTTCGGTGTCTTCTGAACCGTTGGACGTGCCGACAGAGTTTGAGGAGTCGAATGAGTCGTGCGGTTGGAGGCTGGATCAGCTCGATCCGCAGGTGATGCAGATGATTGAGGAGAACCTGGAAGCGATACATGCGGGGAGTAACGATATTGGCGAAATTGAAACTGATCTTTGGGTGCAGAGCCCTGCCGTTCCGATCGATCCCCCAATGGAGCAACCCCTGTACGAAGCGTCCCCCGCGCCGCGCGAGTACGGCCCCGAGCTGGTCAACCTCGACGAGTACCTGCCGCACATCCCGCCCCTGCTCACCATCAACCGCgcccccgccccggccccgcccCCCGACAGGTGGGACCCGCCCGTCTTCACCAAGATGCCAGACCTGGCCTACGCGGACTTGGCGGAGGTGATGAATGCTGATATATTCTAA
- Protein Sequence
- MAALSKWVPIGAATDQPQPHLKLTTIDKIGGIYCHICHSTFGNKKDYDAHYIKHETGSKEITYTCVVCRKDIVGYPSFRGHCYTTHVMKDKFKCNHCDKLFSKQTALLSHFETMHQFKCSTCHNKFKSQKELTMHMIIHKKEFTPPYNCQVCNKLIEDTNDCEQHLEDHSTTSYSCPICDEGISNIQDGANHLAEHFGEVLTNNDESDSEENEFANDSSIDLLGGIYCTHCNKNFKARPEFDTHFVLEHEDQSLTYGCNICGKEYEKYLFFANHCYNHCTKDKFKCEVCSKRFPRLSLLVIHTETYHSGARGDAAYPFTCQQCGLGLSSARRLRDHRRAEHNSSSECPEQGCGKIFNTPKELVLHLKEHSGGAWCRRCGLRFTSPSAALRHLPVHRTTLYACPVCGRTYGEKYLLMKHVTQHFSSVLHVCKICGRVYSHRHRLAQHLKVHAEAKAHACDTCGKGFAKRFLLKQHQNIHADARPYRCPNCPKTFASAPNFKRHMKNIHKVTRLDIKVIIDEANKTDVNKQDNNVTPSSSVSSEPLDVPTEFEESNESCGWRLDQLDPQVMQMIEENLEAIHAGSNDIGEIETDLWVQSPAVPIDPPMEQPLYEASPAPREYGPELVNLDEYLPHIPPLLTINRAPAPAPPPDRWDPPVFTKMPDLAYADLAEVMNADIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279568;
- 90% Identity
- -
- 80% Identity
- -