Ppur059920.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001670.1:4531374-4537817[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.016 1.8e+02 3.7 0.0 39 58 61 80 55 90 0.91 2 8 0.017 1.9e+02 3.6 0.0 39 58 101 120 98 130 0.91 3 8 0.017 1.9e+02 3.6 0.0 39 58 141 160 138 170 0.91 4 8 0.017 1.9e+02 3.6 0.0 39 58 181 200 178 210 0.91 5 8 0.017 1.9e+02 3.6 0.0 39 58 221 240 218 250 0.91 6 8 0.017 1.9e+02 3.6 0.0 39 58 261 280 258 290 0.91 7 8 0.017 2e+02 3.6 0.0 39 58 301 320 298 329 0.91 8 8 0.011 1.3e+02 4.2 0.0 39 58 341 360 338 378 0.84
Sequence Information
- Coding Sequence
- ATGGGCCCAGCCCTTTCCGATGGCTTCACGCAGAAGTCCGGCCTCGACCAGCATCTGCGGATACACACCAAGGTGAAACCTTACCGCTGCGTGATATGCGCGAAAACCTTCTGCCAGAGCGTTCACCTGAAGCAACACATGCGCACGCACACAAACGTGTCGCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTGAGTGTGACGagtccccccccctccctcttcCCCCTCCCCCCTTCCAGTGCGGCGTCTGCGGGAAGCGGTTCAAGCAGAGCAGCCACCTCAACTACCACCTCAAGAACCACAACCCGGGTATCCTAACCACGATATTAATATTCCTAACAACGACCGTCACATCCAACCGCCACGCGCAAAGTGAGCTCCTCGCCTCGGGTCTTGCGCCGTCCTCCCACCAAGCCGGCCTCTGA
- Protein Sequence
- MGPALSDGFTQKSGLDQHLRIHTKVKPYRCVICAKTFCQSVHLKQHMRTHTNVSPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGECDESPPLPLPPPPFQCGVCGKRFKQSSHLNYHLKNHNPGILTTILIFLTTTVTSNRHAQSELLASGLAPSSHQAGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01282606;
- 90% Identity
- iTF_01282606;
- 80% Identity
- iTF_01282606;