Ppur044625.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001660.1:14441822-14442512[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-07 0.00026 22.5 0.0 3 45 21 63 19 63 0.82 2 2 6.5 5.2e+03 -0.9 0.0 18 22 138 142 133 150 0.54
Sequence Information
- Coding Sequence
- ATGCCACGAAAATACAAAAGAAAGGAAGGAGTGCAAGCGCGAGTATGTTCTTGGACTACAGAACAATTGCAGTTAGCCTTTGACGAAATGGAGAAAAAGACTATGGGGATAAACGAAATTTCCCGACAATTTGGCATTCCATCAAGAACATTGCGAAGACGTTATGCTGCTAAAAATACAACGAAGCAGACACTGGGAAAACATCCTATTTTGGATTTTGACAACGAAAAAAGGCTAGTAAAGCACATTCTAAAGCTTGGAGATGCAGGATTTCCCCCAAATAGACAATCCATACGTATGTTAGCTTATCAATTTTCTGAAAAGCTAGAGCTAAAACATAATTTTGACCACGAAAATGAAATGGCTGGAACTTCATGGTTCAAAAGTTTTATTGAACGAAATCCAGAGCTATCTATTAGACAAGCTGAAGGGTTATCTGTGGCTAGAGCCAAAGGCCTGAGTAGAGAAGAAGTACATAACTTCTATGATCTTCTGATCAAGGTTTTGACTGAAAATGATCTGCTGGACAAACCGGAAAGATTATACAATATGGATGAGTCCGGAATCCAATTGAATAATAAACCCGGATAA
- Protein Sequence
- MPRKYKRKEGVQARVCSWTTEQLQLAFDEMEKKTMGINEISRQFGIPSRTLRRRYAAKNTTKQTLGKHPILDFDNEKRLVKHILKLGDAGFPPNRQSIRMLAYQFSEKLELKHNFDHENEMAGTSWFKSFIERNPELSIRQAEGLSVARAKGLSREEVHNFYDLLIKVLTENDLLDKPERLYNMDESGIQLNNKPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00775963;
- 90% Identity
- iTF_00778701; iTF_00056507; iTF_00775963;
- 80% Identity
- -