Hhew026869.1
Basic Information
- Insect
- Heliconius hewitsoni
- Gene Symbol
- -
- Assembly
- GCA_018230445.1
- Location
- DWAN01056408.1:614-1179[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-08 0.00016 21.9 0.0 14 44 32 62 19 63 0.83 2 2 0.97 1.6e+03 -0.5 0.0 18 22 138 142 133 150 0.54
Sequence Information
- Coding Sequence
- ATGCcgcgaaaatataaaagaaaggaAGGAGTGCGAGCTCGAGTATGTTCTTGGACTGCAGAGAACCTACAGTCAGCTTTTGATGAAATGGATAAAAAAACCATGGGAATAAACGAAATATCCCGACAATTCGGAATTCCATCGAGGACATTGCGAAGACGATATGCTGTTAAAAATTCAACAAAGTTGACACTAGGAAAACACCCTATTTTGGATTTTGACAACGAGAAAAGGCTAGTCAAGCACATTCTCAAACTTGGTGATGCTGGATTTCCCCCAAATAGACAAGCCTTACGCATGTTGGCTTATCAATTTGCTGAAAAGCTAGagctaaaacataattttgacCACAAAAGCGAAATGGCTGGAGGTGCGTGGTTCAAAAGTTTTATTGAACGGAATCCGGAGCTATCTATCAGACAAGCTGAAGGCTTATCCGTGGCTAGAGCTAAAGGTCTTAGTAGAGAAGAAG
- Protein Sequence
- MPRKYKRKEGVRARVCSWTAENLQSAFDEMDKKTMGINEISRQFGIPSRTLRRRYAVKNSTKLTLGKHPILDFDNEKRLVKHILKLGDAGFPPNRQALRMLAYQFAEKLELKHNFDHKSEMAGGAWFKSFIERNPELSIRQAEGLSVARAKGLSREE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00775963;
- 90% Identity
- iTF_01282217;
- 80% Identity
- -