Ppur015665.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001646.1:1085366-1086037[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-07 0.00032 22.2 0.0 17 37 1 21 1 26 0.94 2 2 0.97 7.8e+02 1.8 0.0 22 30 112 120 98 127 0.76
Sequence Information
- Coding Sequence
- ATGGGAGTGAACGAAGCATCAAGGAACTTTGGTATACCATACAGAACCTTGAGAAGACATCTTTTAACTGGAAAGTTGAAGGTCCCCCTTGGTCGTACTCCTGTTTTCTGTAACGAGCATGAAAAAAAGCTAGTcgcacacgtaaaaaagttagAAAAGGTGGGTTTTGCTCCTGATCGAAATGATGTTAAGGAAATGGCCTTTCAGTTAGCCAAAAAACTGAAAATTAAAAACCCTTTTTCAGAAAAATCTAAATTAACTGGTAATACGTGGTTCAATAGGTTTATGTCTCGCAATCGTGAATTGAGTCAACGAAAATCAGAAGGTTTATCACTTGCTCGAGCATATGGTGTGAACCGAAAAGACTTCCAAGAGTTTTTCgatttgttagaaaaaaattacaacGAAAATGATCTGGCCAACCATCCCGAAGATGTGTATAATATGGATGAGTCCGGAATACAAGTAAACAACAAGCCAGGAATAGTAGTAGCTACAAAGGGCGCTAAAGATGTTTACACCCTCACCAGCAGTGAAAAAGGAGAAAATGTGACTGTAATTGCTTGCTGTAATGCTCAAGGTCATTTTCTCCACCCCGTTTTGAAATATAAAGGAACATACAGCAAACCACAATTTTCAGAAGGCCTCCCCCAGGATCGCAAGTTTTTATGA
- Protein Sequence
- MGVNEASRNFGIPYRTLRRHLLTGKLKVPLGRTPVFCNEHEKKLVAHVKKLEKVGFAPDRNDVKEMAFQLAKKLKIKNPFSEKSKLTGNTWFNRFMSRNRELSQRKSEGLSLARAYGVNRKDFQEFFDLLEKNYNENDLANHPEDVYNMDESGIQVNNKPGIVVATKGAKDVYTLTSSEKGENVTVIACCNAQGHFLHPVLKYKGTYSKPQFSEGLPQDRKFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00851703;
- 90% Identity
- iTF_01282152;
- 80% Identity
- -