Ppur010521.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001643.1:28700152-28700493[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-11 3.2e-08 35.0 0.0 4 37 35 68 32 73 0.93 2 2 3 2.4e+03 0.2 0.0 7 19 76 88 75 89 0.80
Sequence Information
- Coding Sequence
- ATGGACAATTTACATTGCAGATtcaacaaatcatttttttttccagattACTTGGCGATCGTTATGGAAAACCCCAGAAAAAGACGGACTTGGGATCAGAACAAAATGATTGAAGCGATAAAAGCGCTGCGAGAAAAGAAGATGGGCCTGAAGCGAGCGGTGAAATTGTACTCTGTTCCAAAATCGACGCTAAGGAGATTTGTGCACAGCGACTTGACTCCTGAAGAAGCCGTCGAAAAATGTTTGTCCCGAAAGCTTACAACGAAGTTTACTTATGAAATGGAAACAGATCAAGTATATTTAACACCAGAGCCTTGGAATGAGGACTCTGACTCCGAGTGA
- Protein Sequence
- MDNLHCRFNKSFFFPDYLAIVMENPRKRRTWDQNKMIEAIKALREKKMGLKRAVKLYSVPKSTLRRFVHSDLTPEEAVEKCLSRKLTTKFTYEMETDQVYLTPEPWNEDSDSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01282165; iTF_01282164;
- 90% Identity
- -
- 80% Identity
- -