Ppur010090.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001643.1:25159039-25159383[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-11 4.8e-08 34.5 0.0 4 37 35 68 32 73 0.94 2 2 0.42 3.4e+02 2.9 0.0 7 21 76 90 75 90 0.91
Sequence Information
- Coding Sequence
- ATGGTCAATTTACATCGCAGATTcagcaaatcattttttttttcagattaccTGGCGATCGTGATGGAAAACCCCAGAAAAAGACGgacttgggatcagagcaaaatGGTTGAAGCGATAAAAGCACTGCGAGAAAAGAAGATGGGCTTGAAGCGGGCGGTGAAATTGTATTCTGTTCCAAAATCGACGCTTAGGAGATTTGTTCACAGCGACTTGACTCCTGAAGAAGCTGTCGAAAAATGTTTGTCCCGAAAGcttacaacaaacaaaaaaataattgaaacggAAACAGATCAAGTATATTTAACACCAGAGCTTTGGAATGAGGACTCCGACTCCGAATGA
- Protein Sequence
- MVNLHRRFSKSFFFSDYLAIVMENPRKRRTWDQSKMVEAIKALREKKMGLKRAVKLYSVPKSTLRRFVHSDLTPEEAVEKCLSRKLTTNKKIIETETDQVYLTPELWNEDSDSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01282169;
- 90% Identity
- -
- 80% Identity
- -