Pnig026360.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrausta nigrata
Gene Symbol
nfxl1
Assembly
GCA_949316185.1
Location
OX438958.1:1471863-1474337[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 3.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.01 1.9e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 19 3.1e-07 0.0055 17.6 15.9 3 19 186 202 185 202 0.95
4 19 2.6e-05 0.46 11.5 13.7 3 18 239 254 237 255 0.92
5 19 1.3 2.3e+04 -3.5 1.8 6 10 280 284 279 284 0.89
6 19 1.4e-09 2.5e-05 25.1 13.3 1 19 290 308 290 308 0.99
7 19 1.6e-06 0.029 15.4 18.3 3 19 345 361 344 361 0.93
8 19 2 3.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 19 6.7e-06 0.12 13.4 19.0 1 18 395 412 395 413 0.97
10 19 9.1e-09 0.00016 22.6 15.9 1 19 422 440 422 440 0.99
11 19 0.0002 3.6 8.6 6.4 9 19 488 498 486 498 0.89
12 19 0.059 1.1e+03 0.8 6.4 3 12 509 518 508 518 0.88
13 19 0.89 1.6e+04 -3.0 1.7 14 18 547 551 547 552 0.85
14 19 0.22 4e+03 -1.1 0.2 8 12 568 572 567 572 0.79
15 19 1.2e-05 0.21 12.6 4.2 1 11 588 598 588 599 0.97
16 19 0.68 1.2e+04 -2.6 1.5 15 18 613 616 612 617 0.82
17 19 0.00017 3 8.9 13.9 3 18 629 645 628 646 0.86
18 19 2 3.6e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 19 2.3e-06 0.04 14.9 12.8 1 16 687 701 687 707 0.86

Sequence Information

Coding Sequence
ATGTCGAGGCGGTACCGCGATGTTGCTGCGAAAATGCAGCAGAACGTCCAAAAACACCTAAAAGAGATGAAAGAGCTGTCTTCTTCCGAGGATGAGGAGCCTTACGAGTCCAGTGTGCTCGAGGGAGTCCTACAGACGTACAGGCAGGGTGGCGGTGACACCCACATGTTGGATCGCACTAAAAACTTGTTGGAAGAGGCGATCAGCGGCCGGTCAGTAACATGCCTCATTTGCATAGGTTCCATCAAGAGAGCCGACGCGATCTGGACTTGCGATCACTGCTACTCATACTTCCATCTTTTGTGCATACAGAAGTGGGCCAACGACTGTGTCAGCCTCCGAACTGAAGAAACACATGGCCCCATAGCTGTTGTCAAGCCACAGAAAATCGAATGGTGCTGTCCTAAATGTAGAAATTCATACACCAAAGACGAAATACCTCGTAAGTACAGGTGCTTTTGTAGTAAAACTGAtgatcctccatttcacccatGGTTGTTACCTCATACTTGCGGAGAGGTGTGCGGGAAACCCCTATCTAGTGGGGATAACTGTAAACATAAGTGTTTGCTACTTTGTCATCCTGGCCCTTGCCCACCATGTCCGCAAACTGTAAATGGAGTATGTTATTGTGAAAAGGAACGCAAGAAAGTTAGGTGCAGTGCTGCAAAATGGTCTTGTGGCCAACAGTGTACGAAGTTACTTCTATGCAAGTCACATAATTGTGAAAACATCTGCCATCCCGATAATTGTCCCCCATGCGGCTATGTAAGTGTTCAATCCTGCCAATGTGGTGCTGAGAAAGCTAAACGACCTTGCAATGATCCCACATGGCAATGCAAAAAAGTCTGCAACAAACCATTCTCATGTGGTTACCACAAATGCGAGAAAATATGCCATTCTGGAAGTTGTGGTACTTGTCCAAATTCTGGCACAAGATCTTGTCCATGTGGAGCAAATCAACGGTTTGTCCAATGCCCAGATGTAATGGAAACTTGTATGGGCACATGCAACAAGAAACATGATTACTGTGAACATAGTTGCCCAGAAAAATGCCACAAGGGACCGTGCCCTCCATGCCAAGTGTTAattgagaaaaagtgtctttgCTCAGCCCATACAAGAATGTTGCCTTGTAGTAAAgaatataaatgcgaaactaAGTGCAGGGGTATAAGGCCTTGTGGCAAACATGGCTGCAGTCGTAAATGCTGCAACGGGAACTGCCCACCATGTGAGAAAGTGTGTGACAAACCTCTTCAGTGTGGCCGCCATAAATGCACAATGGTTTGCCACCACGGACCATGCTACCCATGTCCAAGGGAATCCAAAATTACTTGCAGGTGTAAAGAAACATATATCACAGTCTTGTGTGGAAGAGAAAGACACACAAAGCCACCAAAATGCAATCTCCAATGCAAGATCAAATACAAATGTGGTCACATTGATGAAAACAAACATTCCTGCCATTTTGGTGACTGCCCTCCATGCAAAGCTATTTGCAAAAAGAGTTATGAAAAATGTGAACATATTTGCAAAGCAGTCTGTCATGAATATGTGGCTGTTACTTTCAAACCGATAGAAAAGCCAGCAACACCTTGGGAGATCATTCCCccaaaaacaaaaatcatgaccTTGGACTGCTCTCCTTGCGAGACACCTGTCTCTGTTATATGCTTTGGAGAACATGAGACAGAGAATCAGCCTTGTCACTCTGCTAAAAGACGATGCTGCGGCCGACAATGCGGTCGTCCTTTAGCCTGTGGCAACCATTCTTGTTCCTTACTATGTCATCTATACAGTAATGATCCAGAGTACCCTAACGTGCCTTATTCTTGCAAACCATGTAATAGAGAATGCAACATAGCCCGTCCAAATAAATGTACCCACAAATGCAGCATCAGAGCTTGTCATCCTGGCAAATGTCCACCTTGTGAAATTCTGGAGCGAATTCCTTGCCACTGCGGAGTCACTGAGCTGTATTTACGCTGTCGTGAGCTGTCTATTGCTACTGAAGAGATGTTGTCATGCAAGCAGCAATGCCCAAAGAATTTGGAGTGTGGACATCGGTGCCGGAATACTTGTCATTCAGGACCCTGTGGGATTGGTCAGGTGTGCAACAAGAAGACAAAAATACACTGCCAATGTGGCAATTTAAAACGGGATGCACCTTGCAATTTAGTCAGATCTGGTGAAGCTAAAGTTGCATGTGATGAAAGTTGTGAAGCAAAGAAACTTGCAGCTCAAATAGAGAAGGAACAAGAACAGAAAAAATTGAAGGAATTGGAGGAGGAAAGAAACCGTAAAGAGTTAGCCGAATATGAGTGGAAGTTGAGTGGTAAAAAGAAGAAGTATAAAGAAAAGAAGGTTGTTTCCACCGAAAACAATAGAAGCTTTATGCAGAAGTATTGGGTTcctattttatcaatatttattactaCTGTTGGTGCACTTTACAtgtttattgatatttaa
Protein Sequence
MSRRYRDVAAKMQQNVQKHLKEMKELSSSEDEEPYESSVLEGVLQTYRQGGGDTHMLDRTKNLLEEAISGRSVTCLICIGSIKRADAIWTCDHCYSYFHLLCIQKWANDCVSLRTEETHGPIAVVKPQKIEWCCPKCRNSYTKDEIPRKYRCFCSKTDDPPFHPWLLPHTCGEVCGKPLSSGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKKVRCSAAKWSCGQQCTKLLLCKSHNCENICHPDNCPPCGYVSVQSCQCGAEKAKRPCNDPTWQCKKVCNKPFSCGYHKCEKICHSGSCGTCPNSGTRSCPCGANQRFVQCPDVMETCMGTCNKKHDYCEHSCPEKCHKGPCPPCQVLIEKKCLCSAHTRMLPCSKEYKCETKCRGIRPCGKHGCSRKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHHGPCYPCPRESKITCRCKETYITVLCGRERHTKPPKCNLQCKIKYKCGHIDENKHSCHFGDCPPCKAICKKSYEKCEHICKAVCHEYVAVTFKPIEKPATPWEIIPPKTKIMTLDCSPCETPVSVICFGEHETENQPCHSAKRRCCGRQCGRPLACGNHSCSLLCHLYSNDPEYPNVPYSCKPCNRECNIARPNKCTHKCSIRACHPGKCPPCEILERIPCHCGVTELYLRCRELSIATEEMLSCKQQCPKNLECGHRCRNTCHSGPCGIGQVCNKKTKIHCQCGNLKRDAPCNLVRSGEAKVACDESCEAKKLAAQIEKEQEQKKLKELEEERNRKELAEYEWKLSGKKKKYKEKKVVSTENNRSFMQKYWVPILSIFITTVGALYMFIDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00075137;
90% Identity
iTF_01280982;
80% Identity
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