Pdes027024.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963921415.1
- Location
- OY992866.1:1591392-1593866[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 3.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.0052 2e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 18 1.6e-07 0.0059 17.6 15.9 3 19 186 202 185 202 0.95 4 18 1.9e-06 0.072 14.2 11.7 3 19 239 255 237 255 0.92 5 18 0.28 1.1e+04 -2.4 2.0 6 10 280 284 279 284 0.90 6 18 3.2e-09 0.00012 23.1 14.3 1 19 290 308 290 308 0.99 7 18 4.4e-07 0.017 16.2 16.5 3 19 345 361 344 361 0.93 8 18 1 3.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 18 3.4e-06 0.13 13.4 19.0 1 18 395 412 395 413 0.97 10 18 4.5e-09 0.00017 22.6 15.9 1 19 422 440 422 440 0.99 11 18 0.0001 3.9 8.6 6.4 9 19 488 498 486 498 0.89 12 18 0.0076 2.9e+02 2.7 6.8 3 12 509 518 508 518 0.90 13 18 0.19 7.1e+03 -1.8 3.3 14 18 547 551 547 552 0.85 14 18 0.11 4.2e+03 -1.1 0.2 8 12 568 572 567 572 0.79 15 18 2.5e-05 0.95 10.6 3.2 1 11 588 598 588 599 0.97 16 18 0.38 1.4e+04 -2.8 1.6 15 18 613 616 612 617 0.83 17 18 8.4e-05 3.2 8.9 13.9 3 18 629 645 628 646 0.86 18 18 9.8e-07 0.037 15.1 12.8 1 16 687 701 687 707 0.86
Sequence Information
- Coding Sequence
- ATGTCGCGAAAGTACCGTGATGTTGCTGCGAAAATGCAACAAAACGTCCAGAAACATCTAAAGGAGATGAAAGAGCTTTCTTCCTCTGAAGATGAAGAGCCCTACGAGTCCAGTGTCCTGGAGGGAGTCCTCCAGACGTATCGCCGTGGCGGCGGCGACACCCATATGTTGGATCGGACTAAACATCTGCTAGAAGAGGCGATTAGCGGCCGGTCTGTAACCTGCCTCATTTGCATAGGTTCTATAAAGAGAGCTGATGCGATCTGGACTTGCGATCACTGCTACTCCTACTTCCACCTTATATGTATACAGAAGTGGGCCAATGACAGTGTAAGCCTCCGTACTGAAGAAACACATGGCCCCATAGCTGTTGTAAAGCCTCAGAAAATTGAATGGTGCTGCCCTAAATGTAGAAACTCGTATACCAAAGACGAAATACCTCGTAAGTACTGGTGCTTTTGTAGTAAAACTGATAATCCTCCGTTCCATCCGTGGCTGATTCCTCATACTTGTGGTGAGGTGTGCGGTAAACCTCTTTCAAGTGGGGATAACTGTAAACATAAGTGTTTGTTGCTTTGCCACCCTGGTCCATGTCCTCCGTGCCCACAAACTGTAAATGGAGTGTGCTACTGTGAAAAGGAACGTAAGAGAGTGAGATGCAGTGCTGCAAAATGGTCTTGTGGCCAAAGATGTACTAAATTACTTCTGTGTAAGTCACATAAGTGTGAAAACATCTGCCATGCTGATGAATGTCCACCATGCAGTTATGTAAGTGTTCAGTCTTGCCAGTGTGGTGCTGAGAAAGCTAAACGACCATGCAATGACCCCACATGGCAATGCCAGAAAGTGTGCAAGAAGCCATTATCTTGTGGTTACCATAAATGTGGGAAGGTTTGTCATTCAGGAGATTGCGGTACTTGTCCCAACTCAGGAACTAGATCGTGCCCATGTGGGGCAAATCAAAGATTTGTCCAATGTCCTGATGTTATGGAAACATGTTTAGGTACATGTAATAAGAAGCATGATGATTGTGAACATAGATGTCCAGAGAAATGTCATAAAGGAGCCTGCCCACCATGCCAAGTATTGATTGAGAAAAAATGCCTTTGCACAGCTCATACAAGAATGCTACCTTGTAGTAAAGAATATAAATGTGAAACCAAGTGTAGGGGCATAAGACCCTGTGGAAAACATGGCTGCAGTCGCAAATGCTGCAATGGAAACTGCCCACCTTGTGAGAAAGTGTGCGATAAACCTCTTCAGTGTGGTCGCCACAAGTGCACTATGGTTTGTCACCACGGACCTTGCTATCCATGCCCAAGGGAATCCAAAATAACTTGCAGATGCAAAGAAACATATGTTACAGTCCTTTGTGGAAGAGAGAAACATACTAAGCCACCAAAATGCAACCTCCAAtgtaaaatcaaatacaaatgTGGCCACATTGATGAAAACAAACATTCCTGCCATTTTGGTGACTGCCCTCCATGCAAAGCTATTTGTAAAAAATCTTACCCAAAATGTGAACACAACTGCAAAGCAATCTGTCATGAATATGTAGCTGTTACCTTCAAACCAGTGGAAAAGCCAGCCACACCATGGGAGATCATTCCACCAAAAACGAAAATTATGACTTTGGAGTGCCCTCCCTGTGAAACACCTGTCCCTGTTATATGCTTTGGAGAACATGAGACAGAAAATCAGCCTTGTCACTCTGCTAAAAGACGTTGCTGCGGCCGCAAATGTGGTCGTCCTTTGGCCTGTGGTCTCCACTCTTGCTCTCTACTCTGTCATCTGTACTCAAGTGACCCAAAGTATCCAAATGTGCCTTATTCATGCAAACCATGTGATAGAGAATGCAAAGTAGCCCGACCAGATAAGTGTACCCATAAATGCAGCATCAGAGCTTGTCATCCTGGAAAATGTCCACCATGTGAAATACTAGAACGAATTCCTTGCCATTGCAGACTCACCGAGTTATATTTACGCTGTCGCGAGCTGACTAATGCTACTGATGAGATGTTATCATGCAAGCAGCAATGCCCAAAGAATTTGGAGTGTGGACATCGGTGTAAAAACACCTGTCACTCTGGCCAATGTGGGATCGGTCAGGTGTGCAACAAAAAGACAAAAATTCACTGCCAATGTGGTAATTTGAAGAGGGATGCACCATGCAACTTAGTGCGATCTGGTGAAGCTAAAGTTGCATGCGATGATAGTTGTGAATCAAAGAAAATTGCAGCTCAACTAGAAAAAGAGAAAGAACAACAAAGATTGAAAGAGTTGGAGGAGGAAAGAAACCGCAGAGAACTCGCAGAATACGAGTGGAAGTTGAGTGGTAAGAAGAAAAAGTATAGGGAAAAGAAGGTTGTTTCTAACGAAGACAATAGAAGTTTTCTACAAAAGTATTGGATTCCTATTTTGTCAATATTCATAAGTAGTATAGGGGCACTTTATATGCTTGTTGATATTTAG
- Protein Sequence
- MSRKYRDVAAKMQQNVQKHLKEMKELSSSEDEEPYESSVLEGVLQTYRRGGGDTHMLDRTKHLLEEAISGRSVTCLICIGSIKRADAIWTCDHCYSYFHLICIQKWANDSVSLRTEETHGPIAVVKPQKIEWCCPKCRNSYTKDEIPRKYWCFCSKTDNPPFHPWLIPHTCGEVCGKPLSSGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAKWSCGQRCTKLLLCKSHKCENICHADECPPCSYVSVQSCQCGAEKAKRPCNDPTWQCQKVCKKPLSCGYHKCGKVCHSGDCGTCPNSGTRSCPCGANQRFVQCPDVMETCLGTCNKKHDDCEHRCPEKCHKGACPPCQVLIEKKCLCTAHTRMLPCSKEYKCETKCRGIRPCGKHGCSRKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHHGPCYPCPRESKITCRCKETYVTVLCGREKHTKPPKCNLQCKIKYKCGHIDENKHSCHFGDCPPCKAICKKSYPKCEHNCKAICHEYVAVTFKPVEKPATPWEIIPPKTKIMTLECPPCETPVPVICFGEHETENQPCHSAKRRCCGRKCGRPLACGLHSCSLLCHLYSSDPKYPNVPYSCKPCDRECKVARPDKCTHKCSIRACHPGKCPPCEILERIPCHCRLTELYLRCRELTNATDEMLSCKQQCPKNLECGHRCKNTCHSGQCGIGQVCNKKTKIHCQCGNLKRDAPCNLVRSGEAKVACDDSCESKKIAAQLEKEKEQQRLKELEEERNRRELAEYEWKLSGKKKKYREKKVVSNEDNRSFLQKYWIPILSIFISSIGALYMLVDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00075137;
- 90% Identity
- iTF_01279862; iTF_01282989; iTF_01281902;
- 80% Identity
- -