Basic Information

Insect: Pyrausta nigrata
Gene Symbol: rfx7.L
Assembly: GCA_949316185.1
Location: OX438939.1:10827078-10846560[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.9e-34 8.7e-30 104.1 0.0 3 78 150 225 148 226 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.9e-34	8.7e-30	104.1	0.0	3	78	150	225	148	226	0.98

Sequence Information

Coding Sequence: ATGGATAGGACAACTCCATTTCAACCTTGGGCTGCTGAAGAAAGtgcgaaaaatataaaaaccgaAAGAGAAGTAGTGGATGACGCGAAACTTCATCGAGAAAATGTCAATCATCCAAAACATACGCAAACTGCGTCTTACGATAAAGAAAGTGTCGCCGTCGCCAGCAGCTCCCCAGGGTCTTCTAGCATCGCGGGTGCTAGTACCGACCCTGCGAAAGGCAAAGAGCCCAAAATGGACTCTGCCAAAATAGCTTCCATGCAACAAATTGTGGAGAACACTGTCAGTCAAGAAGGTCGACAACGTGTTGCCCAACTGCTAGAAGCAGTTGAGGCTTTAAGCGGGGCCGAGCGACTGTTGCTGTATCTGCGGCTGCCAACTGGCGTACCACCTCATGATCCCTTGAAGCAACCCATTAACCCCCTGGGATCTAGAGCTGAACTTCAGCAGACTGTAACATGGATACAGACACATTTAGAAGTTGACCCTGATGTATCTTTGCCCAAACAAGACGTATATGATGAATACATtgcacaCTGCATGAGTAGCAACATGAAACCCCTGTCAACTGCCGACTTTGGCAAAGTGATGAAGCAAGTGTATCCTAGCGTGCGCCCACGCCGCCTTGGAACTCGTGGAAACTCTCGATACTGCTATGCAGGCCTTCGAAAAAAGGTCAAATTAGAAGTACCGCAATTGCCAGATTTAGGCGAAACATCCAAGGAAGTAAATGTGGCATCCAGAGAAACAGAAAGAATAGTGTGCGATTGGGCCGAATGTAAACTGGGTATAAAGTTCTCGAGTATAGTGGATCTGTCGCGGCACCTCGCTTCGGCGCCGCTCGCGCCGCCCGGCCCGCCCAGCGCCTCGCCGCCGCCGCTCGCGCAGGCGCAAGtACCTACAGACGATGCGGCGAGTAGACATCTGATGAAACAGTTGAAACGAAAGATACAGACGCAAGGAACACCCGGCCGGCCGAAGAAAAACAAGAGCCAAGAGGCCGCCGGCGAATCGCCGCCGTCCACGTCGTACGCACACCACCCGCTCAAGCACGAGGGCGAGCCGCCCGCCGACGCGTACGCCTACCCGCAGCCGCCCTACGCCTACGAGCCGCGCGCGCCCTTCCCCTACGCCGCCCCGCCCCGCGCGCACCCGCACCCCCCCGCGCACCCCGCCGCGCACGACTACCGCGACCCCTACCCCTTCCCGCCGTCGTTCGCGCCGCGCGACCTCTCCGACCCCGCGCACAACCCCGCCATGCCCATCAACCTCAGCAGCGACGCGCGCGCCGACTGGACCCGGCGCCGTCCTCCGGaaccgcccccgcccccgccgcaACCCCCGCGCCAGCCGCTCCCCGGCAAGAAACTCATCCTCGAGACCTACCAGAGCGAGACGCAGCGCCGGACCGAACGCGCGCCGACGGAAGACTTCCCCCAAGAGTACCTGCCGAAGAAGATGCGCGCCGCGGAGATCCTCGGCGGGAAGCTCGCGGCCGCGCGccacgccgccgccgccgcctcgGACGCGGCGCCCGCTTTTTTAGAGGATCCAAAAAACTTAACGAGCCGGTCCAAAAGCACCGCCGCGGCGCTGGCCCGGGAGGAACGACAGGCGGCGAGTCCTCGGTCGGCGAGAGCTCCGACCCCTAGGACGGACCACGTCGGACGCGGGCCCGGCCGCCCGTCGCCGGGCCGGCCCGCCTCGCCCGACTCTTGTTGCGGCCTCGACGGCATCAACATCAAAACGGGAATGATATGCGAGGAGAAGCACACCGAGATACTGAACAGGGAGCGCGTGATCAGCATATGCAACATCGACAAGCACGACCTCGACGACTACCTCAACGAGGGCAACAGCCAGGAGCACGAGGAGGAGTTGCTGCAGTACTTCAACTCGCGCGACGGCGCCCCGCCCCCCGCTACCCCCTCGGGCCCCGCCGCCGCCCCCGCTGACGCCGCCGCTCCTTTTTTAGGACCGAGCCAAGACCCCCACGATGACCACAGTCAAGGtaagaatgaaaaaatatcGCAACTCCGAGAGCTGTTGGCGAAGAACTTAAAAAACCAGAGCGGATCGTCCTCGCAGAACCCACCGAGTGACCAGGACTCCCGGCAGCCCGACTCGACTCAGAATAGCGTGGATAACCAAACCAAAGTACCGGTCTCCGAGGGAGCGTTCAAGCCGCTCGCGGGAGGTGGAGACGTCGCGGCGGCGAACGGACCTGACTTGTCGAACCCTTCCGGTATCGGTCCCGTCAAACATCCGATATCTAACGAAAACGGGACTTCCTTATCGTATATAGGAGATAAATCTTCGGGTCAATTATTACCGTCGATCGGCGGCGCGCCCGTGTACAATGGCCATTGCCACAATGAGCCGCAAAGCCCTACGACCAGAACACAACAGTACGATTTCGTTCCCATATCCGACGGTGTCCACTCTCCCGGAAACTTTCATTCCAAGTCTCCGCCGGAGTTCGGCCAGAGAGGACAGAGCCCTAACAAAGTAAATAAACCGGTCATGAGTAGTTCTTTACAAACGTCGCCGATTTCTCACAGTACGGCCGCTAGCCCGTTCGTCAGCCCTAGGAACACGCCCGTACCGCGCTCGCGGCTATGTCCGAGACCCATACCGAAACTGAATGGGCGCAAACGAAGAAATCCGCTGTCGCTAGGAATGGCTGACCAGTCTACTAAACAATTTGCGATACCTAATGACCAAAAATTTATGGCCAAGATACCAGTATGCGGGCCGGGTAAATATTGTCCGTCGCTTCAACCGATGTCGGCTCCGCCCTCGCCGAATATTCTGTCCTCGCAGTACAAAACGCATTTTCATTGCGGGAACTTACCGAATGGTGCTAATAATCTAACGTTGAACTTTTTACCGGGTGTACCGATTCGAGATCACATGAACGGGGAACTAACACAGCCGCTATCCGCCGATCCTCTATCGAGTGAAGTGAGCCAGTTTTTCCAAGAACCAGTCGTCAATTTTAGATCAGGACACGACTCCTTCAGATCGCAATCCGTGCCACTAAAACAAGCTATCAACAATCTAGGATTGTTGAGTTACAATAATACTCCAGTAGGTTCGATTCCACCTACTCCCGTTCCGAACGAGTTTTGCGATTTTGGATCTTTGGCAGATACCTGCGATATATCCAAAGCTTGTCTTAACCCCGAAACATTAGATAAGATTTACAATGCCATAGACAGCAGCAACGATGTGCTCAGCACAGGTGCGGCCCAAAGTCTTCTCAACTCCAATGACACACTGAGTAACGGTTGTGACCCTCTGCCCGAGCAGCAAATGCTGTCTGACGAACAGTTCAACTCTCTCATTCCGAGCGGAGACGAGCTACTCGATCGGGGAGGCCAGTTTTCCCAGACCTACAGCAATGATTCCACCGCGCCAGACAGCGTCGAAGATTTCCTGAAGCGTCCGAACAGTATCGAATTTGATTTGTCGGAATTAGAAGCGGACAAAAGCAAATACTATACATCACGATCCGTGCCGAGCACACCATTGCCGTTCAAGAGAACGTTGCCTAATTTGCAAATAGGTTCGTGTCGTTCGAGAGAATTATTTCCCACGGATAATTGCTCGAATATATCTAATGGCTTATCGTCAAAGTCTGTGCCATCCACTCCGCAGTTGGTGGAAGATCGGAGGGTTTTCAGCTACAGCAACGGGGATTACCTTATCAACGGTAACTCTGTTTGCGGTTCCAATCAGATGCACGGGATGGGCATTGACAGCGAGCAGGGCCTGGCGTCACCGCTACAGGACATGCTGCGCGAAGACATGCTTAACCCGCTGACGCCCGCCCTGCTGGCCGACCTCGACAAAATGGATGGCACGCCATACGTCGATCTCTAG
Protein Sequence: MDRTTPFQPWAAEESAKNIKTEREVVDDAKLHRENVNHPKHTQTASYDKESVAVASSSPGSSSIAGASTDPAKGKEPKMDSAKIASMQQIVENTVSQEGRQRVAQLLEAVEALSGAERLLLYLRLPTGVPPHDPLKQPINPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMSSNMKPLSTADFGKVMKQVYPSVRPRRLGTRGNSRYCYAGLRKKVKLEVPQLPDLGETSKEVNVASRETERIVCDWAECKLGIKFSSIVDLSRHLASAPLAPPGPPSASPPPLAQAQVPTDDAASRHLMKQLKRKIQTQGTPGRPKKNKSQEAAGESPPSTSYAHHPLKHEGEPPADAYAYPQPPYAYEPRAPFPYAAPPRAHPHPPAHPAAHDYRDPYPFPPSFAPRDLSDPAHNPAMPINLSSDARADWTRRRPPEPPPPPPQPPRQPLPGKKLILETYQSETQRRTERAPTEDFPQEYLPKKMRAAEILGGKLAAARHAAAAASDAAPAFLEDPKNLTSRSKSTAAALAREERQAASPRSARAPTPRTDHVGRGPGRPSPGRPASPDSCCGLDGINIKTGMICEEKHTEILNRERVISICNIDKHDLDDYLNEGNSQEHEEELLQYFNSRDGAPPPATPSGPAAAPADAAAPFLGPSQDPHDDHSQGKNEKISQLRELLAKNLKNQSGSSSQNPPSDQDSRQPDSTQNSVDNQTKVPVSEGAFKPLAGGGDVAAANGPDLSNPSGIGPVKHPISNENGTSLSYIGDKSSGQLLPSIGGAPVYNGHCHNEPQSPTTRTQQYDFVPISDGVHSPGNFHSKSPPEFGQRGQSPNKVNKPVMSSSLQTSPISHSTAASPFVSPRNTPVPRSRLCPRPIPKLNGRKRRNPLSLGMADQSTKQFAIPNDQKFMAKIPVCGPGKYCPSLQPMSAPPSPNILSSQYKTHFHCGNLPNGANNLTLNFLPGVPIRDHMNGELTQPLSADPLSSEVSQFFQEPVVNFRSGHDSFRSQSVPLKQAINNLGLLSYNNTPVGSIPPTPVPNEFCDFGSLADTCDISKACLNPETLDKIYNAIDSSNDVLSTGAAQSLLNSNDTLSNGCDPLPEQQMLSDEQFNSLIPSGDELLDRGGQFSQTYSNDSTAPDSVEDFLKRPNSIEFDLSELEADKSKYYTSRSVPSTPLPFKRTLPNLQIGSCRSRELFPTDNCSNISNGLSSKSVPSTPQLVEDRRVFSYSNGDYLINGNSVCGSNQMHGMGIDSEQGLASPLQDMLREDMLNPLTPALLADLDKMDGTPYVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01281961; iTF_01279920; iTF_01124345; iTF_00076186; iTF_01125179; iTF_00075196;
90% Identity: -
80% Identity: -