Pdes004792.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrausta despicata
Gene Symbol
Hr39
Assembly
GCA_963921415.1
Location
OY992846.1:15159855-15183877[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.11 1.5e+03 -0.6 2.4 58 174 74 213 51 232 0.62
2 5 1.3 1.6e+04 -4.0 5.7 100 177 267 344 220 355 0.52
3 5 9.7e-08 0.0012 19.4 0.1 1 20 440 459 440 465 0.91
4 5 0.012 1.5e+02 2.6 0.0 71 118 479 523 460 546 0.76
5 5 1.7e-64 2.2e-60 206.3 0.0 203 408 551 757 535 757 0.94

Sequence Information

Coding Sequence
ATGAGCGTGATGTCGAGCGAGGGAGACCCCGTCAAGGTGGAAGGGGTACACGTGTCAGTCACCACTATCAGCATGTCCGGACCGGAGACCAACAACGTGAAATTTTCGTACAGCTCGAGTGGAGTGCGCATCAGCGTGTCCTCGGACCCGCACGATGAGGACTCCACGGACGCTGAGATCTCAAAAATCGACTTCACACAACATCAGAACGAGGTCAATATGCGAAACAAAAAGAAGCGGCCATCCAGCGGGGCGCAGTGCGAGCCGCAGTCGAGCGACCGCGAGCGCCCCATGTCATGGGAAGGCGAACTGTCCGACTCCGAGATGGTCATAGACACCACCATCAACAACGATGAAAACAGCAGCTCGCTAGACCTGCAATCGTCGCGGGATTCGATCGACACTCTCCGAAACGTCACGATCAAGACGGAGCCCAAGACCGAGATGTTCCCGGGCCTGGACGAGAGAGCTCTGGACCTGAAGTACCCGGCGCTGCAACCGCACCAGAGGAGCCTTAGTATGAACAGGATATCAGTGCTCACAGACACCACATCGCTCTCGCTGGCGAGGCGGCCATCTTCCCCGAGAAGCGCGACGTCGCTAGTACTAGAACAGAGTAGCGTGCCGATAATGCCGCAGACTTCTCTGGGTGAAGTGCAGAACTTGACCATCAAGAAGGAGACCCAGTTATCAGAACTAAAATGCGAGCCTTCAGTGGGTATGGAGAAGCTGCTAGGAGCATTACACGGATCTCCACTTTTGGGCAGGCTACCAAGAGTGCAGTCCAGCGCGAGCACGGATTCCGCAGTTCATTCCATGTACACGCATAGCGTCTACAGCAGCCCTTCAGCAAGTCCGCGCGCGTCCCGCCACTACACGCCGTCGCTGTCCCGCAACAACAGCGACGCGTCCCACTCGTCCTGCTACTCGTACAGCTCCGAGTTCTCGCCGACGCACTCGCCCGTGCAGGGTCGGCACCCCCACGTCGTGTACCGAGAAACGACCGCGCCCATATTCCCCGCGTCGCCCGCGCACGACGAGGACGGGGAGACGGACGACCGGCTCCACCACCACCAGGGGATCAGTCGCCAGCAGTTGATAAACAGCCCCTGTCCAATCTGCGGCGACAAGATCAGCGGTTTCCACTACGGCATATTCTCGTGCGAATCCTGCAAAGGTTTCTTCAAGCGAACTGTGCAGAATCGGAAGAACTACATGTGCTTGCGCGGAGGCAACTGTCCCGTCACCGTGGCGACGAGGAAAAAGTGTCCCGCTTGTAGATTCGACAAGTGTCTAGGATGCGGAATGAAGTTGGAAGCAATACGAGAAGACAGAACGCGCGGCGGCCGCTCGACGTATCAGTGCTCGTACTCGCTCAGCGGCGCCTCGTCGACCGGCTCGCTGCTCTCCGCGCACGCGCCGTCCACGCTGCGCCACGCCAACAGCCTCACTTGTGTGAACGGTCCCGGATCGTATAGCAGAGGGGAATCAAGCAACAGTCGACTCACTCCTGACATACCCCCATTATTACAAGAAATAATGGAAGTGGAACACTTATGGCAGTACAACGAATCGGAACTGAACCGGCTAGGCAAATCGCCCGGGAGTCCGTCCGCGAACCCTCTCCTAGCAGCTAGCGGGATAACGGCACAGAATTCTAGCCCTGACTTCTTAGCTGACCTGTGCAATATCGCGGACCATAGACTGTACAAGATCGTCAAGTGGTGTAAGAGCTTGCCGCTCTTTAAGAATATCTCGATAGACGACCAAATCTGCCTTCTAATAAACAGTTGGTGTGAACTGTTAGTGCTGTCGTGCTGCTACCGCGGCGTTAGTACGCCGGGTGAGGTGCGCGTGGGCGGCGGCCGCGGGATCACTCTTGACCAAAGTGCCAAGCTCGGattaacaccttgtatagaaaGAATGCTGAGCTTCACCGACCATCTGAGAAGGCTACGAGTAGACCGATACGAGTACGTCGCGCTAAAAGTCATCGTGCTTCTCACATCAGACACGCCTGAACTCCGCGAATCGGAGAAAGTGCGTGCATCCCAAGAGAAAGCGCTCGCAGCGCTGCAGGCGTACACGGCGGCGCACTCGCCCGACACGCCCGCCAAGTTCGGAGAACTACTGCTGCGTATACCGGAGCTGCAGCGTACTTGCCAATTTTTCATGCAAGTCGGCAAAGAAATGCTCAACCCGGCGAACAAGGGTAAAGATGGAGACGGGCCGAGCTTCAACCTTCTCATGGAGCTCCTGAGGGGTGACCATTGA
Protein Sequence
MSVMSSEGDPVKVEGVHVSVTTISMSGPETNNVKFSYSSSGVRISVSSDPHDEDSTDAEISKIDFTQHQNEVNMRNKKKRPSSGAQCEPQSSDRERPMSWEGELSDSEMVIDTTINNDENSSSLDLQSSRDSIDTLRNVTIKTEPKTEMFPGLDERALDLKYPALQPHQRSLSMNRISVLTDTTSLSLARRPSSPRSATSLVLEQSSVPIMPQTSLGEVQNLTIKKETQLSELKCEPSVGMEKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYRETTAPIFPASPAHDEDGETDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGASSTGSLLSAHAPSTLRHANSLTCVNGPGSYSRGESSNSRLTPDIPPLLQEIMEVEHLWQYNESELNRLGKSPGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLDQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDTPELRESEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01386822;
90% Identity
iTF_00806824;
80% Identity
iTF_01280488;