Pdes008377.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- dmd-4
- Assembly
- GCA_963921415.1
- Location
- OY992849.1:7968862-7980828[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-24 9.5e-21 74.5 11.2 1 47 7 53 7 53 0.98 2 2 1.2 1.1e+04 -2.6 5.4 3 11 281 289 279 290 0.88
Sequence Information
- Coding Sequence
- ATGAACACGGGTCGGGCGCGGGTGCCGAAATGCGCGCGGTGCCGCAACCACGGGCTTATCTCCAGCCTGCGCGGGCATAAGAAGGCCTGCGCCTACCGCCATTGCCAGTGCCCCAAGTGCGGGCTCATTAAGGAGCGCCAACGCATTATGGCTGCACAGgTTGCACTAAAAAGACAACAGGCGGCCGAAGACAAGATAGCGCTTCACCTGGCGTCCGTGGAAACTGGGACCCCTTTGGAGAGTTTGCCCCCGGGGCGCATATATGGCATGCGAGTCACGGGGCCCTGTCCCAGCCCGGGGCCCGAGCCTGACTCCGCTGCTGATGATCATACGCCTATCCACATCGATAGCGAGACCAGTGACTCCATGCCGGACTGCTGCAGTACTTCGCCTGATTCTGCAGCTGCCAGTTCTTCGATGCCTCGATCACGGGAAGGGGAAGGTGATGACGGCTCGGTCAGCTCAGCCGGCTTAGAGATGCTTCGGAAGCTGTTCCCGGGTAAGAAGCGCTCCGTGCTCGAGCTGGTGCTGCGCCGCTGCAACCACGACCTGCTTCGAGCCGTCGAGCACTTTAATGCTACTCATACTCAATCAGAAAAGGGTGCTTCAAGCACCTCCAGTTTCGAGATGTCCGTATCGAGTTCTGCAGAGGTCGAAAAGAGGTGGTCTGCGTTCCGCCCAGTGGGGCCTCGCGCGCCTCTTTTACCAGCCTTGGTTATGGGCAGGGTCTGCGGATCTGACTGGCTGGTACCCCTGCCGGCGCTACCGACGTTGTCAACCCCCTTACTGCTACCACTGCAACACCCCCACCAACCCCCGCCGCCTTGCAACCCATGTGCCCCCGATTGCCGGCAATGCAATGCACATCACTAA
- Protein Sequence
- MNTGRARVPKCARCRNHGLISSLRGHKKACAYRHCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVETGTPLESLPPGRIYGMRVTGPCPSPGPEPDSAADDHTPIHIDSETSDSMPDCCSTSPDSAAASSSMPRSREGEGDDGSVSSAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATHTQSEKGASSTSSFEMSVSSSAEVEKRWSAFRPVGPRAPLLPALVMGRVCGSDWLVPLPALPTLSTPLLLPLQHPHQPPPPCNPCAPDCRQCNAHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01503021;
- 90% Identity
- iTF_01282337; iTF_01124629; iTF_01279298; iTF_00076580; iTF_00075587; iTF_00074556; iTF_01125509; iTF_01281387;
- 80% Identity
- -