Pdes028787.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- -
- Assembly
- GCA_963921415.1
- Location
- OY992868.1:350680-352896[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00029 0.85 11.1 0.1 46 86 98 138 85 139 0.83 2 4 0.0007 2 9.9 0.2 49 86 197 232 170 233 0.79 3 4 0.093 2.7e+02 3.1 0.1 50 83 289 321 265 323 0.83 4 4 0.0074 22 6.6 0.1 49 83 390 423 386 425 0.82
Sequence Information
- Coding Sequence
- ATGGATTTAAATAATCCCCAAAACCAAAGTTACTGGTTTGTGGTTCGAGAAGACCAAAgtaatgtttataattttaccatACAAAATCCTCCTCTAGCCGCCCAAGAAACAAGATATATTGTTGATGCAGTAGATCACAGACAGTACATACAGATCAATGAAGCACCAGCTGTTATCCCGGAGGACACCACTCAGATTGCTGAGAAAGAGGTGCCCAAGCCACAGGAGGAAGATGTATTCTGGGaccgaaataaaataaagctgctGCTTACACTTTGCCTTGAAGACAGGTTCAAAAATGCAACAAAAGACAAATCATTGTGGAATGAAATCGCCAGTCAGGTTGGAGCCACGCCTGAAGAGTGCAGCAAAAAGTATAAAAACCTTAGAAGAACATACATCAGGcttttgaaaaagaaaagaattggGAAAGATATCAAATGGGTCCATTTCAACATCTGTGAGGAAGTTTTCAAAGAATGCAAATCATTGCCAGCTTCAGCTTTGGAACCTTGGGAGGACAGTAAAGTACGACAGCTCCTGAGCCTTTACATTGAAAACCTTAATAGATTTAGGAATACAGATTGCTTACAAAAAGAAATCTGGAAGGATATAGCTTCTGAACTTGGTACTACAGAGTCCAACTGCTATCATaagtttaaaaatctaaaaaggaCATATTTTAATTGGTTGGAGAGAAGTCAAGAAACTGGTGGGAAATTAATAAAATGGCCATATCACCAATACTTTGAAAGAATATTTTATAACTACAAACCAATTGCAGGGCCATGGGACAGAGCCAAAACCAGCCAGTTAGTGCAGGCTTATAGCCAAATTGCACACAAGTTTAGAAACCCCAGGTACCAAAAAAAGGAACTTTGGAAGGAAATATCCATTGTAGTTGGAGTATCTCCTGCACAATGTGATAGAAAATTCAGGAACTTAAAACAGACATACTTAAGATTAAGAATGAAAGCAAACACAGGAAGGTGTATGACAAAATGGAGGTACTACAAAGATTTTGAAACAATTTACAACTATTCTTCCTGTCAATCCAACAATAGTGAAGCAGTTGCAAAAGTGGTTTACAAATACCAAGATGAGGATTATGTGGAACAACTGCTGCAGTACTATTTGGAGAATAAGGAAAAGTTCTTTGACCCTCTTGTTAAGAAAAGGAATGTTTGGAAGGTAATTGCTAACAAGCTAAGACTGACAGCTGAGGAGTGTGACAAAAAGTTTCGCAATTTAAAGCAGACCTACATCAGGctcagagaaaaaaaaatggctacCGtgaacgattttgcgcatgtctactCTTTATTCGAAATGATTTATGAAGAACAAAGATCATCAGATAGAAGGCCAAATAACCCTGAGGAAGTGGATCAAATGACAATATCTGAATTTAAAAGATTATTGAGGAATATGCAAGAGAAAAAGGATAGAGAGAAGTTTGAAAGACTTGTAAGAGTGGTAGAGGAATCTAATGATATTCAGAGAGAAAGAAATAGAATTTTACAagctttattaaacaaaaaataa
- Protein Sequence
- MDLNNPQNQSYWFVVREDQSNVYNFTIQNPPLAAQETRYIVDAVDHRQYIQINEAPAVIPEDTTQIAEKEVPKPQEEDVFWDRNKIKLLLTLCLEDRFKNATKDKSLWNEIASQVGATPEECSKKYKNLRRTYIRLLKKKRIGKDIKWVHFNICEEVFKECKSLPASALEPWEDSKVRQLLSLYIENLNRFRNTDCLQKEIWKDIASELGTTESNCYHKFKNLKRTYFNWLERSQETGGKLIKWPYHQYFERIFYNYKPIAGPWDRAKTSQLVQAYSQIAHKFRNPRYQKKELWKEISIVVGVSPAQCDRKFRNLKQTYLRLRMKANTGRCMTKWRYYKDFETIYNYSSCQSNNSEAVAKVVYKYQDEDYVEQLLQYYLENKEKFFDPLVKKRNVWKVIANKLRLTAEECDKKFRNLKQTYIRLREKKMATVNDFAHVYSLFEMIYEEQRSSDRRPNNPEEVDQMTISEFKRLLRNMQEKKDREKFERLVRVVEESNDIQRERNRILQALLNKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00074265;
- 90% Identity
- -
- 80% Identity
- -