Basic Information

Gene Symbol
-
Assembly
GCA_949315895.1
Location
OX438861.1:301257-309702[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.018 62 5.4 0.1 46 86 98 138 84 139 0.81
2 4 0.0061 21 6.9 0.0 47 86 195 232 159 233 0.80
3 4 0.027 93 4.8 0.1 50 83 288 320 261 322 0.83
4 4 0.0017 5.7 8.7 0.0 45 83 385 422 366 424 0.77

Sequence Information

Coding Sequence
ATGGATATAAACAATCCTCAAAGCCAGAGCTACTGGTTCGTGGTGAGAGAAGATCAAAGTAATGTTTATAACTTCACTATACAAAATCCACCTCTGACTGGCCAAGAAGCAAGATATATAGTTGATGCAGGAGACCACAGACAGTACATACAAATCAATGAAACACCAGCTGTTATTCCCGAGGAGACCAGACAGGATCCTCATAAAGATGTTCCCAAACTGCAAGAAGAAGAAAACTTTTGGGATCGAAACAAAATTAAGCTGCTACTCACTCTTTGCCTAGAAAACAGATTCAAAAATGCCACCAAAGACAAAACATTGTGGAATGAGATTGCATGTTTGGTTGGGGCTACAGCTGAAGAGTGcagtaaaaagtataaaaacctTAGAAGGACATACATAAGATTactgaaaaagaaaagaatTGGGAAAGATATTAAATGGGTTCACTTTGGTATATGCGAAGAAGTTTTTAAGGAGTGTAAATCACTGCCGTCTTCAATTTTAGAGCCATGGGAAGATAGTAAAGTTAGACGGCTTCTAAGTCTCTATATTGAGAATCTTAGCAAATTCAGAAGCTCAGATTGTCTACAGAAAGAAATCTGGAAAGACATAGCATCAATATTGGGTACAACTGAGTATAACTGCtatcacaaatttaaaaatctgaAAAGAACTTATTTCAATTGGTTGGAAAGAAGTCACGAAACTGGTAAATTGATTAAATGGCCATACCACCAATACTTTGAAAGAATATTTTACAACTACAACCCGATTGCAGGGCCCTGGGACAGGAGCAAAACCAGTCAGTTGGTCCAGGCCTACAGTCAAATAGCACACAAGTTCAGAAACCCTAGGTATCAAAAAAAAGAACTATGGAAAGAAATCTCAACTGTTGTTGGTGTGACTCCAGCACAGTGTGATAGAAAGTTCAGGAATTTAAAACAGACGTACATTAGGTTAAAAATGAAAGCTAACACCGGAATGTGTATCACAAAATGGAGGTACTACAAGGATTTTGAAACAATCTATAACAATTCATCACACTCATTAGATAATGATGATGTAGTTTCAAAAATGGTATACAAATATCAAGACGATGACTATGTTGAACAATTACTGAAGTTCTATTTGGAGAataaagacaagtttggtgatccacttgtaaaaaaaaggaatgttTGGAAGATCATAGCATCAAAGCTAGGACTGACATCAGAAGAGTGTGACAAAAAGTTTCGCAACTTGAAACAGACATACATTAGGCTCAGAGAGAAGAAGTTGTCCACAGGAAAGTGTAATAGATGGCCTTACTATTCATTGTTTGAAATGATATATGATAAACCAAATTCACCAGGAACAGGGTATGGCCAAAGTAATGAAGTGGATCAGATGTCTGTATCAGAAATCAAAAGGGTTTTGAGGAGTATGCAAGAAAAGAAAGATGGAGAGAAGTTTGAAAGACTTGTTAGAGTAGTAGAAGAGTCAAATAATATTCAAAGAGAAAGAAATCGAATTCTTCAAGCTCTATTGGatagaaagtaa
Protein Sequence
MDINNPQSQSYWFVVREDQSNVYNFTIQNPPLTGQEARYIVDAGDHRQYIQINETPAVIPEETRQDPHKDVPKLQEEENFWDRNKIKLLLTLCLENRFKNATKDKTLWNEIACLVGATAEECSKKYKNLRRTYIRLLKKKRIGKDIKWVHFGICEEVFKECKSLPSSILEPWEDSKVRRLLSLYIENLSKFRSSDCLQKEIWKDIASILGTTEYNCYHKFKNLKRTYFNWLERSHETGKLIKWPYHQYFERIFYNYNPIAGPWDRSKTSQLVQAYSQIAHKFRNPRYQKKELWKEISTVVGVTPAQCDRKFRNLKQTYIRLKMKANTGMCITKWRYYKDFETIYNNSSHSLDNDDVVSKMVYKYQDDDYVEQLLKFYLENKDKFGDPLVKKRNVWKIIASKLGLTSEECDKKFRNLKQTYIRLREKKLSTGKCNRWPYYSLFEMIYDKPNSPGTGYGQSNEVDQMSVSEIKRVLRSMQEKKDGEKFERLVRVVEESNNIQRERNRILQALLDRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00075246;
80% Identity
-