Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757253.1:5240643-5247477[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.1 2.6e+02 3.2 1.0 1 23 52 75 52 75 0.95

2 19 0.15 13 7.3 2.1 1 23 82 105 82 105 0.97

3 19 0.0055 0.47 11.8 1.4 2 23 211 232 210 232 0.98

4 19 5.3 4.6e+02 2.4 2.6 1 23 238 260 238 261 0.94

5 19 0.13 11 7.5 4.1 2 22 496 516 495 516 0.96

6 19 3.9 3.4e+02 2.9 1.0 1 23 615 637 615 637 0.82

7 19 0.6 52 5.4 0.3 2 23 772 793 771 793 0.96

8 19 0.0071 0.61 11.5 0.8 2 23 870 891 869 891 0.96

9 19 0.13 12 7.5 1.4 1 23 899 921 899 921 0.97

10 19 0.14 12 7.4 3.4 1 23 955 977 955 977 0.95

11 19 0.00027 0.024 15.9 4.0 1 23 985 1007 985 1007 0.99

12 19 0.46 40 5.8 1.8 1 23 1082 1104 1082 1104 0.98

13 19 4.9 4.2e+02 2.6 1.3 1 19 1160 1178 1160 1182 0.92

14 19 0.0007 0.06 14.7 0.0 1 23 1277 1299 1277 1299 0.96

15 19 0.01 0.89 11.0 0.6 1 23 1305 1327 1305 1327 0.96

16 19 0.0076 0.66 11.4 2.6 1 23 1417 1439 1417 1439 0.97

17 19 0.00019 0.016 16.4 1.4 1 23 1445 1467 1445 1467 0.99

18 19 2.1 1.8e+02 3.7 2.4 1 23 1558 1580 1558 1580 0.96

19 19 0.0016 0.14 13.5 3.4 1 23 1591 1613 1591 1613 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.1	2.6e+02	3.2	1.0	1	23	52	75	52	75	0.95
2	19	0.15	13	7.3	2.1	1	23	82	105	82	105	0.97
3	19	0.0055	0.47	11.8	1.4	2	23	211	232	210	232	0.98
4	19	5.3	4.6e+02	2.4	2.6	1	23	238	260	238	261	0.94
5	19	0.13	11	7.5	4.1	2	22	496	516	495	516	0.96
6	19	3.9	3.4e+02	2.9	1.0	1	23	615	637	615	637	0.82
7	19	0.6	52	5.4	0.3	2	23	772	793	771	793	0.96
8	19	0.0071	0.61	11.5	0.8	2	23	870	891	869	891	0.96
9	19	0.13	12	7.5	1.4	1	23	899	921	899	921	0.97
10	19	0.14	12	7.4	3.4	1	23	955	977	955	977	0.95
11	19	0.00027	0.024	15.9	4.0	1	23	985	1007	985	1007	0.99
12	19	0.46	40	5.8	1.8	1	23	1082	1104	1082	1104	0.98
13	19	4.9	4.2e+02	2.6	1.3	1	19	1160	1178	1160	1182	0.92
14	19	0.0007	0.06	14.7	0.0	1	23	1277	1299	1277	1299	0.96
15	19	0.01	0.89	11.0	0.6	1	23	1305	1327	1305	1327	0.96
16	19	0.0076	0.66	11.4	2.6	1	23	1417	1439	1417	1439	0.97
17	19	0.00019	0.016	16.4	1.4	1	23	1445	1467	1445	1467	0.99
18	19	2.1	1.8e+02	3.7	2.4	1	23	1558	1580	1558	1580	0.96
19	19	0.0016	0.14	13.5	3.4	1	23	1591	1613	1591	1613	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGTCGAACGCGGTCGGCGAGGTCGGCTCTCTCGTGCGCCCCTTCGAAGGCCGCCAGTGCGGCGACGCGTCCTCCGAGGCCTCCTCGGACGCCGCCGACGACGACTTACCGCAGTGCAAGATACGCAGAAATTACAATTGCTCTAAGTGCACTTTCTACACGCAGAATCCGCGCGCTTTTCTCGTGCACACACGAGACGTACATTTCGAAAGATTCAAAATATACGATTGCCCGAGTTGCGTGTACGCTTCGAGGCATCATCAGAAACTCGTGAGACACATCAAAATGGTGCACGGGGCGGCCGCCGCGACGACAGCCAAAATGGAAGTCGAACTACCCACCGCGACGGAAACCACAGAACCAGTCGAGCGGATAGAGGACTTGCTCGAGGAAATCGAAGAATGCGATGACATCGAGGTCGACGTCGACGACTGCTCGGAGGAGCCGTTCGAGCGCTCCGAGGTCGAAGCGGACAAGGCGATCGCGGACGAAGGTCTCTCTCTACTAAAGAGCGATAACAAATTCTTTTCATGCTCCAAATGCAGCTACGCGACTCACATTAAAGCGCGGTTCTCGAAGCACGTCAAGTACCATTCGATGCCGATGAACAAGTGTACCATGTGTGATTTTCGCTCGCCATACAAATGGAATCTAGACCGGCACATGAAGAATCATGGTGGGAGCGGAAGCTTCAAGTGCTTCATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGTCGCACGAACTGAATCATCACGAGCCGCCGGCGGGCCAATCGGTTGCGAGTCGCCGCCGCAATCGGGTGGGCGCCAGCGACATTATGAACGCGCTCGTCGTCAAGGAGGAGGAAGGGAGCGGCGACTCGCGGTCCTCGTGCTCGGAAACGGGCCTTCAGGGTGCCGAAAAGGAAATGATAAGCTGCAACAGTGATTCAAATGATGCCCCGGCGGCAGATAGAAGTAGAAGAGATAGTACACAAACGCAGGAACACCATGGTCCCCACTCACCCACATCTGACGACGGCAAATCACAAAAACATAACAGAAAAGTACCCAGACCATTACCGCAACTCATTCCATTACATACTTCAACACCTACTAACACGAAGACATCAGGAGAACCACCAGCGAAGAAATTTAAAGACTCGTCAAACTCAGATCCGGCGGAACCAAACAAATCAAGTAAATTCGAAAATTTACCTGTTGATATCACTTTAATACCGGTTAGCAACAATCCTTCAAATACAAAAGAAAATGGTGGCCGCAAGAAAAATCATTCATTTTTCGACAAACTAAAAGAAAGATTGCTAACCGAGACCGGCGAAGAGGGATCTCTGATTTGTAAAAACTGTAACTTTGAAAGCAAATGCCTATCTGAACATTCCGTGCACGAGAAAAATTGCACTTCTCAGTCCAACAAAACTGCAACGAACACGTCACATCCCAGTATGAGTTCAACTCGCTGCCAAAATTGTCGGCACAGGTGTAAATCAAGCGCAGATCTCTTCGTACACATGAAGACTTGtaagaaattagaaaaaatggATGATGACGCATCTGTTGAGATCAAAAGTCAAGATAGCAATGATGGAGTAATAGCAATACACGAGAGAGACACAGAGCCACACCCTATGGAGAACGTTGTATTTGTGTGGAATAATATCCACCAAGATCCGAATAAATTTGATACGCCGCTagacataaatattaatgacGATTCCACGCTCCCAGAAATGTGTAGAAGCTATGATTCAGAAATCGCCGAAGATAATGAAGGCATGAACCTGTCTCCAAGCCAGGCAATGGGTAAAAAAGTTTTCAAATGCCCACACTGCCCATTTTGGGCTTCCACTGCATCAAGATTCCACGTACACATAGTAGGGCACTTGAATAAAAAACCATTTAAGTGTTCATTATGTAAATACAAGTCGAACTGGCGTTGGGATATCACTAAACACATCAAGCTGAAGTCTGCTCGAGATCCCGAGCATAATGACGCGAAAGTGCTTATGACTGATGAAACAGGCCGAAGAAACTACAGCAAGTATAACAAGTTTTTAGCCATGTCTGTTTTGAACGAAAACGGAGAGACGGTGTTTCATTACATTGATCAGACATCTTCGGCCGATCCATCCATCGAGGGTATTGAATCCTATGGTGAAATCAATGAGAACTATAACCAGCCATTGGATATGCAACCGCTTAACCTACACATGAACAGTGATCTCAATGGTGAGGTATTCGACACCCGAAACTTAGATCAAAAGAAACCGAAGAAGACGCTGTGGAAGTGCAAGAAATGTAATTACagggACCCGTCCAAAGAGGCATTACTAGAACACGTCCGGGAGCACTCCAGGGCTGACGGGAATCCGGAGGACATGAAATCTCAAAAGAAGCCCGAGAATCTTCCGGACCCAGCTGACTTAGCATACCGCTGCGGCCACTGCAATCAGCTATCGAACTGGAAACATGTGATACAGAGACACTGTCGCCTGAAGCACGATGGAGTTATTAAAGTCATAACAACCGTGAAACCTAAGCCTGACCCGTCGTTGACTTTGAACGAGATCCAAGGAGACACGTGTAACAAGTGCCCATTCAAGACTAGCGATAAGAAACTGTTACTTGCGCACTTGCAACAGCATCAGCCGTCACCTCAATCTATTTTCAAGTGCTTCTTCTGCCCCTTCTTTGTTAAAGATGAACACGAGTTGATTCAACACCTCGCTCTACATGGCGTCAATGAACCAGAAGACTACCTAGCAAAAGCTATGGGCAGTAAATCCCCGGCCCCGGAGACGAACTCTACGCCAAACTCATCTTCGACGAAGCGACACAAATGCACGGAATGCCCTTACGAAACAAACAGCAAGTCCCAGTACATGTACCATGAGCAGTTTCACCGACTTCCCGCAGACACTCCTTACAAATGCCCCGAATGCAACTATAGCGTGTCCAAGAGGCATTTGCTACACCAACATTTACGAGTTCATGGTATAAACACCAAAAAGCTTGAATCTGAGTTAGAGGGCAAGAACGATGTGAAGGTTGAAATCAATCTTGATGAAATTCCATTTGTATGGGTTTCTGCTAAAAAtgaatttcataaaatgtacaaATGTCGTTACTGTTCCTACGTAAATTCTCAGAAATGCAAAATTCCTAATCATGAAAAAATTCACTGTATCGTTTTTGAAAACAGTGAAACCACCGTATACAAATGTTTGGAATGCAAATTCACATGTGATAGCGCTATAAGGCTAGCCGAGCACTCGAGATCCCACGGCGAGATATACGGTCGCATTTACTGTCCTGTTGACGCAGATATTCCTGATGAAGAACAGATAGCTAAGTTGCGTAAAGTCATTGaagctgaaaaaaatataaatccagATGGAACTCTCAAAGAAGATGAAAATGCAAGCGATAATAAAGAAAGTAAAACACTTTACTTCTGCCAAAAATGTCCGGGAAGGTTTTTTAGTGATGAAGAACTCAGAATACATGACAAATTCCATGATTTATCTTTTCAACATAAATGCAAAAGCTGTGAATATTCAGTTCCGGAGGAAACTGATCTCGATGGCCACACCGTAGTGCATTCCGACGAATATCATACAAAAACGAAAATGCTCAAGTTCATTCACAGTTACAGCGCTGCACACAAAGAGCCTAGTTTAGAGTTAGTCATTTGTCCGACTACATCTGAAGTAACTTGGGTAGTTTCAAATCCGTGCAAGAATTATGATACTGAAAATACCTCTAAAGGATCAAACGAAACGAAACATGTGCCAAAACAATATGCCTGCAAGGAGTGTCCAGCTAGATTTATTAAGAGTTCGGCCCTTACCGGTCACATGGCATTACACGGAAGTAATTATCCTCACAAATGTAAATTATGTAGCTATGCTGTAAGAAATACAGGCAACTTAGCAAAACATGTAGCATTACATGATAATGATGGTAAGCCGTCCACTTGCGATTATGAATCGGGGGAAGATATGGATTATAAGAACATACCCTTGTCAGGAACAGATTTGTTTCAAAGAAAGACTGAGGCTCAAAAAAGAGTTTTAAACGATAAAGATAAATTGGTAAAGCCCAATGATCATTTTCCACCGGTGTTGCAAGCTGACCCTCAGTTCGGATACCTAATGCACGGTAATCCAGAGTTTATATACCCAACGTATTTAAAAAACGGTCGTCAGAAGGAGAAGCGTTACAAGTGTCACAAATGTCCATCTGCGTTTGAGAAAcgagagcaatacaaaattcaCTTATCGTTACATGGATCCaaacaaaggtacaaatgtgaATTATGCGACTATTCAGTGAAGTACTACGCTAACTATGTTCAACATATGAGAAAGCATCAGATGAACGATGAAGCTCAGGCCGAAAGAAAGAAAACCAGTAACGGCATCATAGAAACCGAAACTCAAGAACAGAAGCATGAAGAAAGCGACAACATTAAACTGGCAATCAAAACAATGCCCAAAGGAACACCTAAAAGCGATTTCCAACAGTTTTCAATTAGTGATCAACAAACCCTTAGATTACTGCAACGCAGACGGTCAATGAATAACAATTGTAAAGAACAGGCATCGCCTTCCGACCCATCGCCAACAAAAGATCGAAAATTGCATATGTGTCTCCTGTGTCCGTATACAAATCAACGTCAAGACGCTTTGTTCAACCATTACAAACGACACGATGATACAGATGCTCTTCATACAGGGAATCATAAATGTTCTTACTGCGACCTTGTCGTGGTTCAGTCACATTTCCTGCGAGACCATATAAAAACTCATTTTAATTATCAGAAGACATTGACACCCGAATGTTTTGTCGCTAATGAAAACGTGACTTTTACTTTAACGAAGGTAGATGAAGAAGATTCTCCTATTGATCTCAAATTTGATGTGCAAAACAAAAACGTTAAGTGcaatgaagacaaaatttttGTTAACATACAAACTGGGGAAGTTGTGGTCGAATAA
Protein Sequence: MLQQMSSPSNAVGEVGSLVRPFEGRQCGDASSEASSDAADDDLPQCKIRRNYNCSKCTFYTQNPRAFLVHTRDVHFERFKIYDCPSCVYASRHHQKLVRHIKMVHGAAAATTAKMEVELPTATETTEPVERIEDLLEEIEECDDIEVDVDDCSEEPFERSEVEADKAIADEGLSLLKSDNKFFSCSKCSYATHIKARFSKHVKYHSMPMNKCTMCDFRSPYKWNLDRHMKNHGGSGSFKCFMCNFTADIKQSLTSHELNHHEPPAGQSVASRRRNRVGASDIMNALVVKEEEGSGDSRSSCSETGLQGAEKEMISCNSDSNDAPAADRSRRDSTQTQEHHGPHSPTSDDGKSQKHNRKVPRPLPQLIPLHTSTPTNTKTSGEPPAKKFKDSSNSDPAEPNKSSKFENLPVDITLIPVSNNPSNTKENGGRKKNHSFFDKLKERLLTETGEEGSLICKNCNFESKCLSEHSVHEKNCTSQSNKTATNTSHPSMSSTRCQNCRHRCKSSADLFVHMKTCKKLEKMDDDASVEIKSQDSNDGVIAIHERDTEPHPMENVVFVWNNIHQDPNKFDTPLDININDDSTLPEMCRSYDSEIAEDNEGMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFKCSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMSVLNENGETVFHYIDQTSSADPSIEGIESYGEINENYNQPLDMQPLNLHMNSDLNGEVFDTRNLDQKKPKKTLWKCKKCNYRDPSKEALLEHVREHSRADGNPEDMKSQKKPENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPSLTLNEIQGDTCNKCPFKTSDKKLLLAHLQQHQPSPQSIFKCFFCPFFVKDEHELIQHLALHGVNEPEDYLAKAMGSKSPAPETNSTPNSSSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGINTKKLESELEGKNDVKVEINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSETTVYKCLECKFTCDSAIRLAEHSRSHGEIYGRIYCPVDADIPDEEQIAKLRKVIEAEKNINPDGTLKEDENASDNKESKTLYFCQKCPGRFFSDEELRIHDKFHDLSFQHKCKSCEYSVPEETDLDGHTVVHSDEYHTKTKMLKFIHSYSAAHKEPSLELVICPTTSEVTWVVSNPCKNYDTENTSKGSNETKHVPKQYACKECPARFIKSSALTGHMALHGSNYPHKCKLCSYAVRNTGNLAKHVALHDNDGKPSTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKTSNGIIETETQEQKHEESDNIKLAIKTMPKGTPKSDFQQFSISDQQTLRLLQRRRSMNNNCKEQASPSDPSPTKDRKLHMCLLCPYTNQRQDALFNHYKRHDDTDALHTGNHKCSYCDLVVVQSHFLRDHIKTHFNYQKTLTPECFVANENVTFTLTKVDEEDSPIDLKFDVQNKNVKCNEDKIFVNIQTGEVVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00365400;
90% Identity: iTF_01281822;
80% Identity: -