Paur009434.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- zfy1
- Assembly
- GCA_963584085.1
- Location
- OY757258.1:1434320-1445594[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5 4.3e+02 2.5 0.3 2 23 6 27 5 27 0.95 2 13 0.09 7.8 8.0 0.1 2 23 1000 1022 999 1022 0.89 3 13 1.8e-05 0.0016 19.6 1.7 2 23 1128 1149 1127 1149 0.97 4 13 0.00012 0.0099 17.1 1.9 1 23 1155 1177 1155 1177 0.98 5 13 0.0087 0.75 11.2 2.5 2 23 1184 1205 1183 1206 0.95 6 13 2.2 1.9e+02 3.6 4.6 5 23 1219 1237 1217 1237 0.97 7 13 0.022 1.9 9.9 1.1 3 23 1244 1265 1243 1265 0.96 8 13 0.023 2 9.9 0.1 2 23 1281 1301 1280 1301 0.96 9 13 0.0033 0.29 12.5 0.9 3 20 1309 1326 1307 1329 0.85 10 13 0.0011 0.098 14.0 0.2 1 23 1337 1359 1337 1359 0.98 11 13 0.0062 0.53 11.7 7.2 1 23 1365 1387 1365 1387 0.98 12 13 7.2e-06 0.00062 20.9 1.3 1 23 1393 1417 1393 1417 0.98 13 13 0.00072 0.062 14.6 5.5 1 23 1423 1445 1423 1446 0.96
Sequence Information
- Coding Sequence
- ATGGATCAGCTGGTGCAGTGCCCCGTGTGCACCCTGTACCTGCACAATGGGATGACGTTAGAGTCTCATCTTGATACTCATCCTAAAGATCAGGTAATAAAAGCTCTGTGCAGCCTAACAGCAAAAGGGAGTAGTAGTTATGGCAGCAGAACATCAACTCCATTGCATTCTGAGCGCTCATATAGAAGTCGTTCGCGCACCCCAGCTACTGATGACAGATGGCCCAGCTCTCATAGGAGTAGTGATGCTGACCGTTACTGGCGCAGAACACCAAGCAGAGCATCAAAATCAAGCCAAATGTTAAACCCTTCTCGAAATGGGACACCAGATATTAGAATGGGTGACACCACCTTTGACAACAACATAATTAGTGCAAGTCAGTTTTCAGGGTCATCATATCCCATAAAATCTGATAAAACCCAACAAACATATTCAAGCACACAAATTGGTGAATTTGAGCAGCCCTATGCATTTTATCAGGATTCAAATGAAGATAGAGAAATTAAATATTCACGCAGTGCAGAATATAATTCTCTGGATGCCACCAGCACAGTTTTCTCACATAACTCTCCAGCTGCAACTTCAAATGTTAAATTACAGCCAACATTGCTTCCTGCAGTGCCTCGAAGAGGCAATGAGAATTTAGTAAAAGTGTTACCAAAACCAAATAATATACTTGTAAAGACTAATGTTGGTGGAGTTCAGTACATTACACCAAGTGTGAAGCCGATGCATGTAATGGTGCCTACAGCCCCAACATTTGTCCAAAAGAATGTACAAAGTAACATGATAGTGACAAGTAGGATCCCTGGAGCAACAGTAGTAGAATCAAAATCTTTAGCACCCACAATACCTACAAATCAGTTCAACCAATTGACCAGCAGTACTTTTACACCGGGTACAACAGTAGTACAAAACTCTCAGATAATTTATAGAGAAATGGTTCATAATATTGATGGTAAGCGTTTTATTTCTTGTGTGCCTTCCGTACTCAGTCATGAGAATGTTACTAATGTTACACAGGGAACTTCAATGTATCAAAACCTAATGGTTGTAGATCAACTTGGAAATGCTCCTTGTATGTACACAACACCTCAGTCTATCATACCAAAGTCTTGTACCACATCCATATACCCTGATACTATGTCCCACATGCCTAGCAGCTCATCACATGTTGACAAACCTGTGTCTTCAGCACATGACCCTAATAAGACACTAATAATAGAAGTAGGTCCTATTGTGGCTCCCACAACTGATTCTGATGCAGCCACAACTAATTCGATCACCACACAAACTGAAATAGATGTTAACAAACATAATAAGGTTGATGCTTTCTCCTTGGAAAAATGTGAGACACCAGGATCTAGCAAAGGTTTGAAAATCCTTAGCAACATCAAAGTGGAAGTTCCAGTACAACATCACAAAAATATGCTGAATACAGTTATGGATTTAACTGGGAGTAATGAGCCCGAATACCCTGATAGGTCGGAAACCCCTGAGAAAATCCTACCTGAcctggatgacaataaccacaTGTCAGACGATTGTACTCAACCATCGATATCCAGCAGCGACAGTGTCGTTTCGCACACATTTTCTGTGATAAAAAATGTTGGTAACCCACCATCTTACAAAGATTCTTCAACGAAATCTAGTGTTGCAGACAGTAAAATCGATGCAGAGTTTTCTGATAGCTGTCCAGTACCAGATTTAATATGTAATGAGAAACCATCGATATCTCCATGCAGCGAACTGTCCGAGAACGGAGAGAACTCGACGGATCGCGCCCCAGCGGCCGCCGCTGCGTCTCCGGGGCCCCAGGCCAGCCAGCTGGGCAGCCTTGACACCACTATCGATAAGAAAGCCCATTCATCACAAAAGCCTTACAGGCACAACACGCTCCGATTGAACAATATCTAcgtaaaaaagaacaaaaaaatattgcaaataaaaaacgCGAAGCCATTTCAGTCTAGTGGCGGGTCAGACTGCGCCGAAATAGAGCCTCAAGCGTCGTCGTCCTCGTGCAGGTCGCCCGAAAACTATTCCATGAGCAAACTGAGTTCAGAAAGAAGCGAGGGTTTCGAAAAGATAAGCACTCTCCAAACCATATCAGTGGAGAGGATCACCGAGGAGAATAACGAGCACGACAACCACGACGACTTCGACGCCGACACGGAGGAGCAGTCGATGGACATCGAGCCGCTCGCGCCGTCGAGCCTGAACAGCTCGGACCAGTTCACGACCAGCGTGGACGTGGTGCAGGTGAAGGAGGAGGTGAACACGAGCAACGAGTACAGCAACGAGAACAGCACCTCGAACCGTGAGCTGGTCCCGCTGGAGACGCTGCGGCCGATCAACGTGATCACTTACGGAAACCTGCCCCCGAGCGAGTTCGACGACGAGTCGAACCACAGGGAGCTGTTGGAGCTTGAGGCGGCGTCCAAGAGCAGCATGATGAACGAGAACTACTTCGGAGACAACATCTACGCGGACTACTTCACGCCGGATAGAGTGGAGTCCTTCGACTCGGTGCGGGAGTCGTCGTCCTACTCGAAAGAGAAGGATATGTACATTTGGGGGGAGTCGTCTCACAAGGAGAGCGAGTTCGTGCTGCCGAATTTTATCCATGAGAGTTACAAGATAGCGGATAGTACTCCACCCGAGTACGCCGAGTTGGGGGGTAGGGAGGGGCACGTGGTGGGGGAGGTGGAGGTGTGCGAGCGGGACAGCAAGGCGGACGTGCTGAGCGAGGAGGAGGCGCCGCTGAACATCTGCGCGGACGAGCGCATGCCGCCGCGCGGGGAGCTCAGCGGCCAGGAGAGCAACGGAGACATGGAGTCCCCGTGGAGTGGAATGTACACCGACGTGCCGCCAGCGGAGCCCTACGACCTCATCGCTCGCGAGAGTTGGGTCTCCGACGGCTCCGAGATGGACACCAATGAGAAACGGGATAATTTAGAGGAAGAGCTCCATTTCCCCAAAGGGCGCGTCTCAACGTGCACGACGTGCGGCGCCAAGTTCCCCTCGCTGCGGGACGTGCGCGCGCACAAGGCGGCCGCGCACGCCCCCGCGCCGCACGCCTCGAGCACCAAGACCTCGTACAGCCGCATGCTGACTGCCAAGATCATAAAGAAGGAAGAGAAGACTGAGGAGACCACTGTCATTGCTGGCAACATGCTGACCGTAGACTCGAAGGAATCCATCACGACGACGATGCTGCAAGTGTACGACGTGATGGGCGAGGCCAAGCCCAAGATCGAAGCGATCATCAAGCAGGAGGCCAAGCCAAGGCGGAAGCGGGACTTCGTCTGCCCCACTTGCAAGGTCGACCAGCTGACGGACGTCGCTTTCCACGCTCATCTCAAGATCCACCCTTTGGAGTGCCTGACGTGCGGCAAGTGCTTCTTCCGGCGCGCCAACCTCGCGCTGCACATCAAGACGCATCTCGGGATCAAGAATTATAAATGCGAGGTGTGCGAGAAGCGGTTCATCACGAAGCAGAAGCTGGCcgagcaccacaacgtgcacaCCGGCCGCGCGCCCGTCAAGTGCACGGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACCGCGACCGGCACCACTTCCAGAAGAAAGCGAAAGTGCGCGACTTCGTGTGCCACTGCGGCTCCGTGTTCCACTCGCGCGCCAAGCTGCACTGGCACCAGGAGACGCACGACGAGCGGCCCAAGGCGTGCCTGTACTGCTCCGACAAGTTCGTGCACGCCGCCTCGCTCACGCGCCACGTGCGCCGCACGCACAACGTGTACTTCCTGTCGGAGCGCAGCAAGGCCAAGGAGAACGTGCCTTGTCCCGTTTGCAAGCAGATGTACCTCCGCACGAACCTGCGCGCGCACCTGCTCACGCACAGCGGCAAGCGGCCCTACCTGTGCATCGTGTGCAACAAGTCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACATGTCCCGCTCCGCCAAGCCCTTCAAGTGCACCCTCTGCAAGGGCGCCTTCATACGCCAAGCGGAGTATATATCCCACATGAACGCGCACAAATCCGTCCGCCCGTATACGTGCAACTACTGCGGATGCCAGTTCATTAGGAAATACAACTGTCAACGGCACGTCCGCGAGCACGAGATGGCCAAGAAATATGTGTGCAAGGTGCCGGAGTGCGGTAAGTCGTTCCACAGGAGCTACTATCTCTCGGAACACATGAAGGTCCACAGCGGCGCCCGGCCGTTCTCCTGTAACATTTGCGGCAAAACATCTAGTAACAAATCGAACCATAACAAACATTTGAAGATACATCACGCGCGCGAACCGGTAGCGACTGAGGCGTAA
- Protein Sequence
- MDQLVQCPVCTLYLHNGMTLESHLDTHPKDQVIKALCSLTAKGSSSYGSRTSTPLHSERSYRSRSRTPATDDRWPSSHRSSDADRYWRRTPSRASKSSQMLNPSRNGTPDIRMGDTTFDNNIISASQFSGSSYPIKSDKTQQTYSSTQIGEFEQPYAFYQDSNEDREIKYSRSAEYNSLDATSTVFSHNSPAATSNVKLQPTLLPAVPRRGNENLVKVLPKPNNILVKTNVGGVQYITPSVKPMHVMVPTAPTFVQKNVQSNMIVTSRIPGATVVESKSLAPTIPTNQFNQLTSSTFTPGTTVVQNSQIIYREMVHNIDGKRFISCVPSVLSHENVTNVTQGTSMYQNLMVVDQLGNAPCMYTTPQSIIPKSCTTSIYPDTMSHMPSSSSHVDKPVSSAHDPNKTLIIEVGPIVAPTTDSDAATTNSITTQTEIDVNKHNKVDAFSLEKCETPGSSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGSNEPEYPDRSETPEKILPDLDDNNHMSDDCTQPSISSSDSVVSHTFSVIKNVGNPPSYKDSSTKSSVADSKIDAEFSDSCPVPDLICNEKPSISPCSELSENGENSTDRAPAAAAASPGPQASQLGSLDTTIDKKAHSSQKPYRHNTLRLNNIYVKKNKKILQIKNAKPFQSSGGSDCAEIEPQASSSSCRSPENYSMSKLSSERSEGFEKISTLQTISVERITEENNEHDNHDDFDADTEEQSMDIEPLAPSSLNSSDQFTTSVDVVQVKEEVNTSNEYSNENSTSNRELVPLETLRPINVITYGNLPPSEFDDESNHRELLELEAASKSSMMNENYFGDNIYADYFTPDRVESFDSVRESSSYSKEKDMYIWGESSHKESEFVLPNFIHESYKIADSTPPEYAELGGREGHVVGEVEVCERDSKADVLSEEEAPLNICADERMPPRGELSGQESNGDMESPWSGMYTDVPPAEPYDLIARESWVSDGSEMDTNEKRDNLEEELHFPKGRVSTCTTCGAKFPSLRDVRAHKAAAHAPAPHASSTKTSYSRMLTAKIIKKEEKTEETTVIAGNMLTVDSKESITTTMLQVYDVMGEAKPKIEAIIKQEAKPRRKRDFVCPTCKVDQLTDVAFHAHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCEVCEKRFITKQKLAEHHNVHTGRAPVKCTVCDDTFRRYSNMVQHRDRHHFQKKAKVRDFVCHCGSVFHSRAKLHWHQETHDERPKACLYCSDKFVHAASLTRHVRRTHNVYFLSERSKAKENVPCPVCKQMYLRTNLRAHLLTHSGKRPYLCIVCNKSFTTKWNLKLHRWTHMSRSAKPFKCTLCKGAFIRQAEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHLKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076955;
- 90% Identity
- iTF_01282725;
- 80% Identity
- -