Paur008681.2
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757257.1:4111931-4122599[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0062 0.53 11.7 1.5 3 23 210 231 209 231 0.96 2 23 0.3 26 6.4 0.3 1 22 620 641 620 641 0.95 3 23 5.9 5.1e+02 2.3 0.3 1 22 682 703 682 705 0.82 4 23 0.029 2.5 9.5 2.3 2 21 715 734 714 735 0.94 5 23 1.2 1e+02 4.5 0.1 2 23 743 765 742 765 0.90 6 23 0.0053 0.46 11.9 0.1 3 23 786 807 784 807 0.96 7 23 0.0068 0.58 11.5 2.4 1 23 813 836 813 836 0.95 8 23 0.11 9.5 7.7 0.0 1 23 862 885 862 885 0.90 9 23 0.0048 0.42 12.0 3.5 1 23 890 912 890 912 0.97 10 23 0.014 1.2 10.5 0.2 1 23 918 941 918 941 0.95 11 23 0.00092 0.079 14.3 1.3 1 23 954 976 954 976 0.98 12 23 0.0013 0.11 13.8 4.0 1 23 1025 1048 1025 1048 0.96 13 23 0.0089 0.77 11.2 1.5 1 23 1111 1134 1111 1134 0.96 14 23 0.00097 0.084 14.2 2.1 2 23 1152 1174 1151 1174 0.95 15 23 0.077 6.6 8.2 0.1 2 23 1180 1202 1179 1202 0.93 16 23 0.072 6.2 8.3 0.1 1 21 1247 1267 1247 1268 0.94 17 23 0.0011 0.093 14.0 0.6 1 23 1278 1300 1278 1300 0.93 18 23 0.00031 0.027 15.8 0.2 2 23 1387 1409 1387 1409 0.93 19 23 2.9e-07 2.5e-05 25.3 1.4 3 23 1416 1436 1415 1436 0.98 20 23 0.017 1.5 10.3 1.0 1 23 1454 1476 1454 1477 0.93 21 23 0.11 9.2 7.8 0.0 1 23 1497 1519 1497 1519 0.97 22 23 0.011 0.97 10.9 0.9 1 23 1525 1548 1525 1548 0.96 23 23 0.00022 0.019 16.2 0.4 1 23 1556 1579 1556 1579 0.96
Sequence Information
- Coding Sequence
- ATGAGCGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCggatgactcggatcctcccgTCCTTGCTTCGAAAATCAAGGATTGTGTCTCTGTACAGATAAGCGAGAATGACGACCTGCCGACGAATGTCTGCAGGAAATGTGTGGACAATGTCAATAACTGGCATATTTTCAAGTCAGTGTGTGAAAGGACACAAAACAAACTAGAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGataaaaataaagagtGAACCTTTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGGTCATACCCTGACAATGAGaaTGGTGCTGGCTCCAGTAAGGTGCAGCCAGAAGGTCCACCTATCTTGGCGTCATTGGGGCTCACTCCACGAAGTGATAAGGGTGTTGAAAGTGAGaaagatgaagaagaagaagaagaggagGAGGAAGAGATAAGGCAGCCAAGGAAAAGGCATCCCAAGGTGGCCAGCATGCCTGAAGTGTCCATCACAGTAATGCGCCCCACCGGAGAGACTTTGCACGCCCGACAAGGTATCCAACAACTCGCTTCCAAAGACTGCCTCGTCTGCGGCCGGTCCTACAGGTACTCCCACAACGCCAGGAGACACGAGCTCACCTCCCACAGCTTTGATAGATACACCAACAAAGtgacaaacaaaaaacaaccgTCACACATGCAACCAAAACTAAGACCAAATCCATTTAATCCTAAAGCTAGGCTTATGCCAAACCCCATTAGCCATAAAATGCAACTTCTTTCTAAACCGATGCCGACGAAAATGGTTCCACACAAAGTACTTACTCCGCCGAAACCGGTCCTCATAAAAACTCAAAGGAAAGGATCCCAACATAACCTACCGTACCCTCTCCGTATTAAAGCGCTAAAAGAcctacaaataaagaaaaaggaaccacaaattttaaaaacactTCTTACATCCAAACCAGAAGTTTTGGTGTCTGAGCCTGAAATTGTAAACTCTGGTCCGGAGAGTCCAGAAACTTTGATTTCTGAACCAGAAATCGCGTCCTTCCAAGTGGAAGCCATATTATCGGAGCCCGATGGTTTTGATCAACAGCACGGCGAAGATGAGATGGACGGTGATATGACTAACAATCAAAGTCAGAACTACGACACAGTCGACATGGAGTCGGACAATGAAATAGAGATAGCGCGTGAGCAGGATCCCGATAATGAaggtgaagaagaagaagaacataaCGGCGATGACGAACATAATCAAAATGACGAAGAAATAAATCACTACGAGGGACAAAGTGATAACGAGAAAGATCAAGCAGAGGGAAATGATATTGAAGAGAGTGAGGAGCATATCGGCATCGATGAAAGTGATCTCAAAGCCGCAGACGATAACCACGAAAGAGACGAAGCTAACGATGAAGGTGAGAACGAAGATCAAGACATGATAAATCACAATGAAACTCGGGACGAAGAGGATGAGGAATTGCCGCCAGTGGAATTGGCACCAGAAGTAGAAATTAATGAGGATATGCAAACCAACTCTTACAACAGTGAAGTAAATGAGGATGAAGAGGAGGAGCTTGAAGAAACTGCTGAATTAAATGATACAGCGGAAGAAGAGGTAGTCAAAGAACTTGACCCGGACAAACTGTATGTCACGAAAACTCAAAGAgatttcattcagaaatatcgTGACATTATTGAGCAGATCAATACTAAACGTTGCCTATGCTGTGATCGCGAACATCCTCGTAGAAAAGCAGTTATCCAACATTTGCAGAAGAATGGACATAAGGTTCCTAAGCATACTTGCTACAACTGTGTAGTGACATTTGGACATATCGGCGCGCTACTCAGTCATATGAGATCAAATAGCTGTACAAACTTATGGAAAATAATTTACAACGAAAATGGTATTACTGATGACTTGGTATTAGAAGAACCAAAAGACAACAAAGTTCTGTATAAAGATATTTTCAATGCAAGATCGTATGCATGCAAGTTATGTCCAGCTAAATTCCAGTTGAAACAATTTATTATGAAACACGTACTAGATGTCCATGAAGATGGCCAGTCTAGAGTGCCTCTCCATTGTGTGCATTGCAGAGCACGGTTCAAAGATAAGAGTCTTATCAAAAAACATATTCGAAACGGCGAATGTACAGTGATCATTTCATGTGATCTGTGTTCAGAGAAATTTGGAAATATACAAGATTTTAACGATCACGCTATGGCTGTTCATGCCGGAAGCTTCGACCAGTCTGATAATCAAAACAAGTGTGTTGACGGACGACCTACCGATTGTCCAATTTGTGGAAAGAAGAATAGTAGCTACCCGAATTTGGTAAAACATTTGAAGATTATTCATAACGAAGAAAAACCTCATTACTGCCAACATTGCGACTCCAAATACGAACAAGCTGCAGATCTTAACAAACATATTTATATGGAGCATTCTGATAGAAGTTTGGGTGTGCAGAGCACCGAACCTGACATGTCCTTAGTCAAGGAGGAAGCTGAAGAGTACCACTATTCCTGCACAGAATGTAATGCCATATTCGAAACCGTTGACGCTTGGACGGATCATCAGGTTGCTGAACATAACCAGATTGCGCACCACTGCGACCAATGTGACAAGAAATTCTTGCGTCCATCCGAGCTCGCCGAGCATAAGAACACCCATTTGCGTGTCAAGTTCTACCCTTGTAGTGTTTGTACTAATTCCTACAGTACTCCACAAAAGCTGTCAGAACACGTTCAACAAGCGCATCCCGGCGTTGGTGCACTCGCTACAATGGAATCTGAGTTCTACTGTGACATATGCATAAGGTCATTCAAAAGTCGTCAAGCATACTCCAATCACATGCGTATTCATTCTAAAATCCCCACGACCAACAGGAAACCCGGGGACGTTAAAGGATTCGCGCCACAAATTATTGGTAAGCCAATCAAACAGTTCACTGCCGTTCAACCCGGTTTCGTGGCATTTAAACCGAATTGCAACGTTCCCAATGCCCCGTACTGTTGCGATATTTGCGGAAAAGGATTTATGCACAAgaaaaatatttggaaacaTAAAAAAGTTCTACACGCTGACCTCCTCAATGACAGAAATGATAGCGAGGAAAATACAATGCATGCATCTACTGAAGACGATGAGTACAATGCTGATGAAAACGGAGCTCTGCTGTCTACTCCTCaatttaatagttttaatttcacgaattttgctaataACATACAACAACAGGCAACGCCTCAGGCGGATCCTTTACCGTTCTCTTGCGAACTTTGCTTCAAACGGTTTCCGATCCGAACCAGTTTATGGAAGCACAAGAGAGCTAAACATGGGATCACCGGCTCAGATAACCAGCAACCGAGCGAAGGCGGTGGCAGGTCGAGTTGCactatttgtaaaataacattttccgaTAAAAAATCGTACTATCGCCACAGAAAGAATGTCCACAAATCATCTTCTCAGATGTGTAAGATTTGTGGCAAGCCACTAAACTCGACGTTGGAGCTGTACGAACATCTCAAAGCCGCTCACGCCCGAGAGCTGCTGGGCTATAATGCGAACCAAGGTAACAATAGCAAGATGCAAGACAACGAACaagaactggatgcagactacGAAAACGACCAGGACTCTGCAGATCCAAGCGTAGAATATCAAGCCAGATACCCTTGCGACGCCTGCGGCAAGCAGTTCGTCGGGTTGCTCGCGTTACAAAACCATCAGTGCATCAACCAGGTTACGGCCCAACCTCAGACCTTCGATTGCGAAATCTGTCATAAGAGCTACACATCGATCGCGGCGCTCAAAAGCCACCGCGGCTGGCATCTACGCTCGCCCGACGGCAAAGCGGCCGCCAACAACACCGGTCTGTGGATGCCGCAGCACAAAGTGACCAGCAAGGTCAGCAAGCACGAGGTCGTCGACCCCGTCCAACTCGCGCGCGTGCAGCACTCGGCGCCAGCCGCGACCGTAGCCAAGAGGAGACTGCCGCCGGAGGTCGAGGTGACGGTCGTAAACCCGAACAAAAAGCTGAGATCGGACGACTCCGTCGAGACGGACCAAGGCTCGGCCGTCGAGGACAGGTACTGCACGATATGCGACAAAGAGTTCACGAAGCGGGCCGCCTACCTGCGGCACATGGACGAGGTGCACCAACCGAATTCGGTGTTCTGTCCGGTGTGCGACAAGAGCTTCACGCGGAAGTCGACTCTGCTAGTTCATATGAAGAAGCATTACGAGGGCGGCGAGGGCAGCTCGTCCGGGCAGGCCGCGGAGGAGGAGGACCACGCGTGCGACCTGTGCGGGGCGCAGTTCGACAGCGAGAAGGGGCTGCGGGCTCACAAGGCGCGGCACCACGGGGAGGAGTCCGGCGAGTCGGAGGACGagggcggcgcggcgccgcaGCCGGGCGAGTTCACGTGCGGCCAGTGCGGCGACGGCGTGGCGACCCCGCGCGACCTGATCGCCCACCGCACGATGCACGCGACGCCCACTAAATTCTTCTGCAATATCTGCAAAGTGTACTTCGCCCGCGCCCTCGACCTGTCCTCGCACACGCGCTCGAGGCACTCGGACAACGAGAAGGTCTTCTTCCCTTGTGCCATGTGTGACCGTTTCTATATGAACAAGAAGAGTTTGCAGCGCCACATTGAGATGGCTCATTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSDPPVLASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKSVCERTQNKLELLIKKDGSQLEEIKIKSEPLSDEAYDDGVVIDGSYPDNENGAGSSKVQPEGPPILASLGLTPRSDKGVESEKDEEEEEEEEEEIRQPRKRHPKVASMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTSHSFDRYTNKVTNKKQPSHMQPKLRPNPFNPKARLMPNPISHKMQLLSKPMPTKMVPHKVLTPPKPVLIKTQRKGSQHNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIVNSGPESPETLISEPEIASFQVEAILSEPDGFDQQHGEDEMDGDMTNNQSQNYDTVDMESDNEIEIAREQDPDNEGEEEEEHNGDDEHNQNDEEINHYEGQSDNEKDQAEGNDIEESEEHIGIDESDLKAADDNHERDEANDEGENEDQDMINHNETRDEEDEELPPVELAPEVEINEDMQTNSYNSEVNEDEEEELEETAELNDTAEEEVVKELDPDKLYVTKTQRDFIQKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEEPKDNKVLYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVIISCDLCSEKFGNIQDFNDHAMAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKYEQAADLNKHIYMEHSDRSLGVQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQAHPGVGALATMESEFYCDICIRSFKSRQAYSNHMRIHSKIPTTNRKPGDVKGFAPQIIGKPIKQFTAVQPGFVAFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEDDEYNADENGALLSTPQFNSFNFTNFANNIQQQATPQADPLPFSCELCFKRFPIRTSLWKHKRAKHGITGSDNQQPSEGGGRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGNNSKMQDNEQELDADYENDQDSADPSVEYQARYPCDACGKQFVGLLALQNHQCINQVTAQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPVQLARVQHSAPAATVAKRRLPPEVEVTVVNPNKKLRSDDSVETDQGSAVEDRYCTICDKEFTKRAAYLRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSGQAAEEEDHACDLCGAQFDSEKGLRAHKARHHGEESGESEDEGGAAPQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRSRHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00035015;
- 90% Identity
- -
- 80% Identity
- -