Paur015081.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757262.1:11594607-11596850[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-12 2.3e-09 37.6 0.0 2 37 16 51 15 55 0.95 2 2 1.9 2.2e+03 -0.7 0.0 22 30 142 150 129 151 0.77
Sequence Information
- Coding Sequence
- ATGCCTCGTCAGTACGTGAGGAAAACTTTACGAGCAACATGGAAAGATGAAGACTTAGAAGAAGCTATGAGTGCCGTAAGAAGTAAGCAAATGGGAGTGAACGAAGCATCAAGGAACTTTGGTATACCATCCAGAACCTTGAGAAGACATCTTTTAACTGGAAAATTAAATGTCCCCCTTGGTCGTACTCCTGTATTCTGTAACGAGCATGAAAAAAAGCTAGTCGCACACATAAAAAAGTTAGAAAAGGTGGGTTTTGCTCCTGATCGAAAGGATGTTAAGGAAATGGCCTTTCAGTTAGCcaaaaaactgaaaattaaaaaccCTTTTTCAGAAAATTCTGAACTAGCTGGTAATACGTGGTTTAATGGGTTTATGTCACGCAATCGTGAATTGAGCCAACGAAAATCAGAGGGGTTATCACTTGCTCGAGCATATGGTGTGAACCGAAAAGACGTCCAAGATTTTTTCgatttgttagaaaaaaattataacgaaAATGATCTTGCCAACCATCCTGAAGATGTGTATAATATGGATGAGTCCGGAATACAAGTAAACAACAAGCCAGGAAAAGTAGTAGCTACAGAAGGCGCTAAAGATGTTTACACTCTCACCAGCTGTGAAAAAGGAGAAAATGTGACTGTGATTGCTTGCTGTAATGCTCAAggtaattttctccctcccgcTTTGATATATAAAGGAACATACAGCAAACCTCAGTTTTCAGAAGGCCTCCCCCCAGGATCGCAAGTTTTTATGAACAAAAAATCATCTTACATAAATTCGGATCTCTTCATGAAGTGGTTTGAAGAAGTTTTTCTTCGTCACAAAAGCTCACGAAAAACTCTGTTGGTTCTTGATGGTCACAGCTCTCACAGCAACAACATTCGTTTGCTTGAAGTGGCTGCAGAAAATGATGTCATACTGCTGTGCCTTCCAAGCCACACCATGCATGCTTTGCAACCTCTTGACAGAGCTTTTTTCAGTCCTTTAAAGGTTTACTTCACCCAGGAAGCAAAAGCGTGGATGGTGAGAAATAAGGACAAAAAGCTGACTCGGTACGATGTTTCAAAACTGATTGGAAAGGCTTGGGGTAAAGCTGCCACAGTATCCAACGGAGTTTCTGCTTTAAAATCATGTGGAATTTTCTCCTTTGACCCGAGCGCAATACCTGACCATTACTTTTCCCTGTCTGATTCATTGCAAGAACAAAATTTAATGGAGATTGCGACACAAAACAGAGATAAAGAGACTCCAACAGCATCTTCATCAATGCTTGAACATGCCAATAAAGAAATACTTGAAAAAGACTCGGAACTTTCCCCACAAGTACGGGCTCTTATTGAGCCAATTCCCGGGCCTTCAGGGCTACAAAATTCTGCTGAGAAAGATATAAGGCAAGAGCAAAATTTTGTTGAGATTGAGACTGAAGACGAAAATAACTGGACTCCAATAGCATCTCCATCGTTGCTTGAAGATGCTGATAAAGACATACTCGACAAAGATTCGGAAACTTACCAACAAGCACGTGCTCTTATTAAACCCATACCCGGGTCTTCAGGGCTTAAGAATGCCATTGAGATAGATGTTGGGTCAGCGCAAATAAGCATGGAAGAAGCAATCCAAAAAACTACTCGCAAGAAAGTTGTTTTAGATAAGTCAAATAGTCATACCCATGATCCTGAGACAGAAACTTCAATTGATCGTGCTTGTAGTGTTGAAAAAGACCTTGAACCTTCTCAAGCATGTACTATTACTGACCCAATACCTAGGCCTTCTGGACTGAAATCTAGCGCTGAATTAAATGGTGAACCAGCGCAAATAAACACAGAAGAATTAATCCAAAGCAATCTTCGAAAGAATATTGACTATAAAGCTGGTTCAAAGCCCTCCTCAGTTAAGTCCTACAATCAGACAAACAAGCCAAAACCAGGCCCTTCAGGAATGCATCTTTCAGAAATAAAAGTTTGGTCAGTTCAAATTACACCTCAAAAGAACGATTCATCCTCGCATAACGCTAAATCTCAGGAAACACCGACCAAAGTACTGACGGATATTTACCCCATTCCTAAGCTGCCTTTAAACAtatcaaaaagaaaacaaaaagctGTTATTCTCAATTCTCCTGAAAATATCCAAAAGAAGAAAAATGCAAAGAAAAGTGAAAAAGTATCCCAAAATATACCTTTGAAAAACAGAAGGAAGAAAAGGCAAGATAAGTCATTGATTTCAAAAAAGTAG
- Protein Sequence
- MPRQYVRKTLRATWKDEDLEEAMSAVRSKQMGVNEASRNFGIPSRTLRRHLLTGKLNVPLGRTPVFCNEHEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLKIKNPFSENSELAGNTWFNGFMSRNRELSQRKSEGLSLARAYGVNRKDVQDFFDLLEKNYNENDLANHPEDVYNMDESGIQVNNKPGKVVATEGAKDVYTLTSCEKGENVTVIACCNAQGNFLPPALIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINSDLFMKWFEEVFLRHKSSRKTLLVLDGHSSHSNNIRLLEVAAENDVILLCLPSHTMHALQPLDRAFFSPLKVYFTQEAKAWMVRNKDKKLTRYDVSKLIGKAWGKAATVSNGVSALKSCGIFSFDPSAIPDHYFSLSDSLQEQNLMEIATQNRDKETPTASSSMLEHANKEILEKDSELSPQVRALIEPIPGPSGLQNSAEKDIRQEQNFVEIETEDENNWTPIASPSLLEDADKDILDKDSETYQQARALIKPIPGSSGLKNAIEIDVGSAQISMEEAIQKTTRKKVVLDKSNSHTHDPETETSIDRACSVEKDLEPSQACTITDPIPRPSGLKSSAELNGEPAQINTEELIQSNLRKNIDYKAGSKPSSVKSYNQTNKPKPGPSGMHLSEIKVWSVQITPQKNDSSSHNAKSQETPTKVLTDIYPIPKLPLNISKRKQKAVILNSPENIQKKKNAKKSEKVSQNIPLKNRRKKRQDKSLISKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076407;
- 90% Identity
- iTF_00076407;
- 80% Identity
- -