Ahor019534.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756402.1:7176478-7183799[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-11 4.9e-09 36.9 0.0 2 37 16 51 15 55 0.95 2 2 9.3 3.4e+03 -1.1 0.0 22 30 142 150 129 151 0.77
Sequence Information
- Coding Sequence
- ATGCCTCGTCAGTACGTAAGGAAGACTTTACGTGCAACATGGAAAGATGAAGACTTAGAAGAAGCTATGAGTGCCGTAAGAAGTAAGAAAATGGGAGTGAACGAAGCATCAAGGAACTTTGGTATACCATCCAGAACCTTGAGAAGACATCTTTTAACTGGAAAGTTGAAGGTCCCCCTTGGTCGTACTCCTGTATTCTGTAACGAGCATGAAAAAAAGCTAGTCGCACACATAAAAAAGTTAGAAAAGGTGGGTTTTGCTCCTGATCGAAAGGATGTTAAGGAAATGGCCTTTCAGTTAgccaaaaaactgaaaattaaaaaccctttttcaGAAAAATCTGAATTAGCTGGTAATACGTGGTTTAATGGGTTTATGTCTCGCAATCGTGAATTGAGCCAACGAAAATCAGAGGGGTTATCACTTGCTCGAGCATATGGTGTGAACCGAAAAGACGTCCAAGATTTTTTcgatttgttagaaaaaatttaCAACGAAAATGATCTTGCCAACCATCCCGAAGATGTGTATAATATGGATGAGTCCGGAATACAAGTAAACAACAAGCCAGGAAAAGTAGTAGCTACAAAGGGCGCTAAAGATGTTTACACCCTCACCAGCTGTGAAAAAGGAGAAAATGTGACTGTGATTGCTTGCTGTAATGCTCAAGGTAATTTTCTCCCTCCCGTTTTGATATATAAAGGAACATACAGCAAACCACCATTTTCAGAAGGCCTCCCCCCAGGGTCGCAAGTTTTTATGAACAAGAAATCATCTTACATAAATTCGGATCTCTTCATGAAGTGGTTTGAAGAAGTTTTCCTTCGTCACAAAAGCTCACGAAAAAGTCTGTTGATTCTTGATGGTCACAGCTCTCACAGCAACAACGTTCGTTTGCTTGAAGTGGCTGCAGAAAATGATGTCATACTGCTGTGCCTTCCAAGCCACACCACGCATGCTCTGCAACCTCTTGACAGAGCTTTTTTTAGTCCTTTAAAGGTTTACTTCACCCAGGAAGCAAAAGCGTGGATGGTAAGAAATAAGGACAAAAAGCTGACACGGTATGATGTTTCAAAACTGATTGGAAAGGCTTGGGGTAAAGCTGCCACAGTATCCAACGGAGTATCTGCTTTAAAATCATGTGGAATTTTCCCCTTTGACCCGAGCGCAATACCTGACCATTACTTTTCCCTGTCTGATTCAATGCAAGAacaaaatttaatggagattgcGACACAAAACAAAGATAAAGAGACTCCAACAGCATCTTCATCATTGCTTGAACATGCCAATAAAGAAATACTTGAAAAAGACTCGGAACCTTCCCCACAAGTACGTGCTCTTATTGAGCCGTTACCCGGGCCTTCAGGGCTACAAAATTCCGCTGAGAAAGATATAGGGCAAGAACACAATTTCGTTGAGATTGAGACTGAAGACGAAGATAACTGGACTCCAATAGCATCTCCATCATTGCTTGAAGATGCTAATAAAGACATACTAGACAAAGATTCGGAAACTTACCAACAAGCACGTGCTCTTATTGAACCAATAACCGGGTCTTCAGGGCTTAAAAATGCCGTTGAGATAGATGTTGGGTCAGCGCAAATAAACATGGAAGAAGCAATCCAAAGAACTCCTCGCAAGAAAGTTGTTTTAGATAAGTCAGATAGTCATACCCATGAGCCTAAGCCAGGAACTTCAGGCTTGCGTGCTTGTTCTGTTGAAGAAGACCTGGAACCTTCTCAAGCATGTACTATAACTGACCCAATACCTGGGCCTTCTGGACTGAAATCTGGCGCTGAATTAAATGGTGAACCAGCGCAAATAAACATTGAAGAATTAATCCAAAACAATCCTCGAAAAAATATTGCAGAGCTCGATTCAGGACTCTTAAAGTTGATTGACTATAAAGCTGGTTCAAAGCCCTCCTCAGATAAGTCCCACAATCAGACAAACAAGCCAAAACCCGGCACTTCAGGAATTCATCCTTCAGAAATAAAAGTTAGGTCAGTTCAAATTACACCTCAAAAGAACGATTTATCCTCGCATAACACTGAATCTCAGGAAACACCAACCAAAGTATTGACGGATATTTACCCCATTCCTATACTGCCTTTGAACatatcaaaaagaaaacaaaaagctGTTATTCTCAATTCTCCTGAAAATTtccaaaagaagaaaaatacaaagaaaagtgaaaaaatatcCCAAAATATACCTTTGAAAAACAGAAGAAAGAAAAGGCAAGATAAGTCATTGATTTCAGAAAGTAGTGATGAAATAACAAAAGAAGAAATCTCTGATTTAGAAAACAAgccaagaaaaagaaaagttgcTGTACGGAAAGGGGAAAAAAATGCCAAGAAGGATGAAggaggaaaaaataaaaaaggtggaAAAGAACATCTCAAATCAAAaaagaaacgaaaaaatatatcaCCATCAACATCTGGAAACAGTTCCTATGAACATGAACATGAgcctaatattaatttatctgaAGAGGAAATCTCAGACAAGGACGTGAACAAGTGTGCAGAATGTACTGAGGATTATTATCAGACCCAATCTACTGAAGATTGGATTCAGTGTACATCTTGTTCGGTCTTCCGGCAGCAACTCCTGGACTCGTGTAAAATGGAAGGGATGGTAACCTTCACTGCGCAGCAGCCGCCATACGTAGAACTGGCTTACGCCAAACATACGGGCAGCGTTGACGGTGCTTGCTACTGGGTGCTGGTGAAAAAAATCCAGTACGTCTTCTTCAAGCCGCACTAG
- Protein Sequence
- MPRQYVRKTLRATWKDEDLEEAMSAVRSKKMGVNEASRNFGIPSRTLRRHLLTGKLKVPLGRTPVFCNEHEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLKIKNPFSEKSELAGNTWFNGFMSRNRELSQRKSEGLSLARAYGVNRKDVQDFFDLLEKIYNENDLANHPEDVYNMDESGIQVNNKPGKVVATKGAKDVYTLTSCEKGENVTVIACCNAQGNFLPPVLIYKGTYSKPPFSEGLPPGSQVFMNKKSSYINSDLFMKWFEEVFLRHKSSRKSLLILDGHSSHSNNVRLLEVAAENDVILLCLPSHTTHALQPLDRAFFSPLKVYFTQEAKAWMVRNKDKKLTRYDVSKLIGKAWGKAATVSNGVSALKSCGIFPFDPSAIPDHYFSLSDSMQEQNLMEIATQNKDKETPTASSSLLEHANKEILEKDSEPSPQVRALIEPLPGPSGLQNSAEKDIGQEHNFVEIETEDEDNWTPIASPSLLEDANKDILDKDSETYQQARALIEPITGSSGLKNAVEIDVGSAQINMEEAIQRTPRKKVVLDKSDSHTHEPKPGTSGLRACSVEEDLEPSQACTITDPIPGPSGLKSGAELNGEPAQINIEELIQNNPRKNIAELDSGLLKLIDYKAGSKPSSDKSHNQTNKPKPGTSGIHPSEIKVRSVQITPQKNDLSSHNTESQETPTKVLTDIYPIPILPLNISKRKQKAVILNSPENFQKKKNTKKSEKISQNIPLKNRRKKRQDKSLISESSDEITKEEISDLENKPRKRKVAVRKGEKNAKKDEGGKNKKGGKEHLKSKKKRKNISPSTSGNSSYEHEHEPNINLSEEEISDKDVNKCAECTEDYYQTQSTEDWIQCTSCSVFRQQLLDSCKMEGMVTFTAQQPPYVELAYAKHTGSVDGACYWVLVKKIQYVFFKPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279187;
- 90% Identity
- iTF_01279187;
- 80% Identity
- -