Basic Information

Insect: Pycnomerus fuliginosus
Gene Symbol: BCL11A
Assembly: GCA_963924575.1
Location: OZ004622.1:20650546-20680435[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 8.3 4.8e+02 2.4 0.1 2 11 21 30 20 33 0.86

2 6 2.1e-07 1.2e-05 26.3 1.3 2 23 469 490 468 490 0.98

3 6 1.5e-05 0.0009 20.5 5.4 1 23 496 518 496 518 0.99

4 6 2.7e-07 1.6e-05 26.0 2.9 2 23 703 724 702 724 0.97

5 6 2e-05 0.0012 20.1 3.3 1 23 730 752 730 752 0.99

6 6 0.00013 0.0074 17.6 0.4 1 22 760 781 760 781 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	8.3	4.8e+02	2.4	0.1	2	11	21	30	20	33	0.86
2	6	2.1e-07	1.2e-05	26.3	1.3	2	23	469	490	468	490	0.98
3	6	1.5e-05	0.0009	20.5	5.4	1	23	496	518	496	518	0.99
4	6	2.7e-07	1.6e-05	26.0	2.9	2	23	703	724	702	724	0.97
5	6	2e-05	0.0012	20.1	3.3	1	23	730	752	730	752	0.99
6	6	0.00013	0.0074	17.6	0.4	1	22	760	781	760	781	0.97

Sequence Information

Coding Sequence: ATGGGACACAATCAAGCAGACGCAGACGGGGCGGGCTCCGAAAACCACCAAGACATCCTGACTTGTGGAGTGTGCCAAAAACCGTTCGCACTCTCCGACATAGTCCGCTTCATTCAGCATAAAATAGCGTCTTGCAACAAAGAGAACTTTGGACAATGTTTTACGAACGCAGACCGGGAACGAGACAACGACGACGGGGCTCTGCCTCTGTCCACGATAAATACGAGGCGGCCCAGTATATCGGCCCCCATCTCTGGAAAGAAGGCGTCTGGAAGCCGTGTTCACACCCCACCGCCGGCATCGCCGAGATTGCCGGCGCCGGGGGATTTGTGCGTAGATGGGGCGGCGTCCTCCACCCCCAAAAGAAGAGCCTCGGCGTCTCCTTTGACCTCCTCGAGTCTCGAAGACGGAGAAGACATCAAACCTGACATCAAACAGGAACGAATGGACACGACCGAGGAGAGTCAGTGCAAGAAATCGAGGACGGAGTTTGCTGATGCTGAATCGAACACGACACACAGTGaaCCCAGCAACTACGTGTGCAGCACCTGCAAAGCCCGCTTGCACTCTGCGTGGAGGTTGGTGCAGCACGTCCAGCACTCTCACGGCATCAAAATTTACATCGAAAGCTCCCCGAGCAGCAAAAGCAGCAACATCAACAACCACAGCTCGAGCAGTGCCAGCAGCAGTTCCTCGGGATGTTCCTCGGGGGGCCCTGCGCCACCCCCGAGTATGCGTCACCACCTCCTCCCACCCCCGGATTTACACAATCCTTTCGGCGTCGGTGGCCTTCTTCGATTACCCCTACCACCATTAAATCACGGTCCAGTTCCTCCCGCTCCTCTCTTCTCCAGACCGGAGCACCATTATCGCATCGATCAATTAGTTAGCGAACAATTTAGACACCACGGGCTTAActtggcggcggcggcggcggctgCTGTCGCCGCCCAAGGTGTACCTCCACCCCACGCGAGTTTTCCGTCACCGGCGGAGCGAGCGCCCTCGGCTAGTAGTGTCACGCCGAGGGAACGCAGCACCCCGCAACCACTATCCCTTGAACCTCAACTGGATTTTTACTCGCAGCGGTTGAGGCAACTCGCTGGTACTACCAGCCCGGGAGCGGCACAGGCGAGTTCGCCGTCTCCACGGAAGCACTCACCGCCTTTCGCAAGTCCCTCGCCTTCGCAGCTGCCGCCTACCACCATCCCCAACAACACCAGCGGTAGCAGCAGCCACAGCAAtaacaacaacaacaataacAGCACCAGTAGTGGTAGCAGAGCTACCAGTACTTCACCCCCTGCCAAAGACGACCCCCACTTAACCACAACCCCTAAATCCTCGTCAACTCCACCTTGCAAACCCTTATCTCCCAGAAATACCAACTCCGCAGAAGCTATCCAGTGCGACTATTGCGGAAAGAAGTTCCGATATCAGAACAACTTGGAAGTTCATCGCAGAACTCACACCGGGGAGTTACCCTACAAATGCACGGTTTGTGATCACGCCTGCTCTCAGAGCTCAAAACTGAAACGCCATATGAAGATACATCGAACCCCTGAAGATCGCACTAGTAATGCTGGCTCTGTGGAGACTCTGGACGGAGATGATAGCGAAGACGAAGATGAActtgaagaagaagaagacgaaGAAGAAGAACTTGATGAGGAAGAAGCCGAGGATTTGAGTATTCCCTCGCAAATGCAATCGAAAGAATCCAACCAATCCGCTTCGCTAGTAGGAGAACTGATGGATAAATTTGGGCTTAGCAACATAGCCCAATATAGTGAAGCCTACAAGCAGGCGTTGCAAGAATCAAACTCCGCTCTAAAGCTACAACTGGCCAGTAAAGATCGCGATAACAACAACAGCACCACTTTGAATAATCAATTCGCGAAGAACTTACTGCCAGGCCCTCCGCCTCAACCCCTACCCTTATTTCCTCCCTTCAATGATTCCTACGAGGCGTCAAAACGATTAAAACTGGACCTTGAAAGAAACGACTGGTGGCTGTCGGGTTTGCCACGAGAACACAAAGGGTTGCCCGGGCCCAGTGCGCTCCTCCCCAACAACTTGATAAAAAAAGAAAGTAGACGTAATGACACTTGTGAGTATTGCGGTAAAGTGTTTAAAAACTGTTCGAATTTGACGGTGCATCGTCGATCGCACACCGGAGAAAAGCCTTACAAGTGTGAGTTGTGCTCCTACGCTTGCGCGCAAAGTTCGAAATTAACGAGACACATGAAGACGCACGGCAGGATCGGGAAAGATGTTTATCGCTGTAGATTCTGCGAGATGCCCTTCTCCGTGCCGTCGACCTTGGAAAAGCACATGCGAAAATGCGTGGTCAACCAGGGCAAGGGTCATTTGCTGTCCACGATGCCGATGCTGTCAGGAGACGAAGATTCTTCGGCGAGTATTGCGTCCAAAGAGGCAACATGA
Protein Sequence: MGHNQADADGAGSENHQDILTCGVCQKPFALSDIVRFIQHKIASCNKENFGQCFTNADRERDNDDGALPLSTINTRRPSISAPISGKKASGSRVHTPPPASPRLPAPGDLCVDGAASSTPKRRASASPLTSSSLEDGEDIKPDIKQERMDTTEESQCKKSRTEFADAESNTTHSEPSNYVCSTCKARLHSAWRLVQHVQHSHGIKIYIESSPSSKSSNINNHSSSSASSSSSGCSSGGPAPPPSMRHHLLPPPDLHNPFGVGGLLRLPLPPLNHGPVPPAPLFSRPEHHYRIDQLVSEQFRHHGLNLAAAAAAAVAAQGVPPPHASFPSPAERAPSASSVTPRERSTPQPLSLEPQLDFYSQRLRQLAGTTSPGAAQASSPSPRKHSPPFASPSPSQLPPTTIPNNTSGSSSHSNNNNNNNSTSSGSRATSTSPPAKDDPHLTTTPKSSSTPPCKPLSPRNTNSAEAIQCDYCGKKFRYQNNLEVHRRTHTGELPYKCTVCDHACSQSSKLKRHMKIHRTPEDRTSNAGSVETLDGDDSEDEDELEEEEDEEEELDEEEAEDLSIPSQMQSKESNQSASLVGELMDKFGLSNIAQYSEAYKQALQESNSALKLQLASKDRDNNNSTTLNNQFAKNLLPGPPPQPLPLFPPFNDSYEASKRLKLDLERNDWWLSGLPREHKGLPGPSALLPNNLIKKESRRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRIGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKGHLLSTMPMLSGDEDSSASIASKEAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01290764;
90% Identity: iTF_00753308;
80% Identity: -