Pful027348.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- Hr39
- Assembly
- GCA_963924575.1
- Location
- OZ004624.1:10967718-10981989[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.11 1.8e+03 -1.1 2.2 47 109 198 264 164 311 0.55 2 4 1.6e-08 0.00027 21.4 0.0 1 27 384 410 384 441 0.78 3 4 0.032 5.4e+02 0.6 0.0 84 116 439 471 409 491 0.66 4 4 7.5e-74 1.3e-69 236.5 0.1 205 408 512 710 486 710 0.96
Sequence Information
- Coding Sequence
- ATGGCCGCAGACATGAGGTCCCCGAACGTGACAGTCACTCCCATCAACATGGAGTCCTCCTATCCGTCGACGGATCTGCCGTCGGAGGGACCCCAGAGGACAAGGAGCGCCCCCCATCCGGGTCTCCTAGGCAACGGGGACATATTGGACACTTGCGCCGATGCGGAAGTCGCCCAAATAGACTTCCAGTGTTCCGTCAACATGAGGCACAAAAAGAAACGAGATGGCGCTGACGTACCAAGGCCGATGTCGTGGGAGGGGGAGTTGTCCGACCACGAGCGGGACATGTGCGTCGACGACGATCACGGTTCTCAGATGCCGGAAAACCTGTCCTTGTCTCAACCGAAGCTGAACACCCTGATCAGCATCGACTCAAAAGAGAGCCCCATCCTTCGGCTGAAACAACTGCCGATCGGCAACTACTCCATCCACAGCACCCCCAGCAATTCGCCCCTGCTCGGCCAGAGACACGGACTGACGAACGTGCCCATCGTCAGCCACAAAGATCTGATGCACAAGGCGTTGAACGTACCCCCAACCCCCAGCCCCGATTCCGCCATCCATTCGGCGTATAGTGTTTTTAGTTCGCCGAATCAGAGCCCCCTGACTCAGAGACACATAACGTTGACGCCGAATCTGAGTCGGAACAATAGTGATGCCTCCCATTCGAGTTGTTGTAGTTATTCGAGTGTTTCGGTTTCGGTGTCGCCGACGCAACAGTTCTCGCCCACTCACAGTCCCATTCAGGGTCGCCATATGCACAATGTCCACAACAGTCCCCTACATCACAACGTCGTCTACAGGAGTTTACAAGAAGATCCCAACGTGCAGTACAGCACCGAACACGATGGCCTTGACGAGGCCGAAGATAAGACTGGCTTAGTTCATACGTCATTACCCGCCCAACCCGGCATATCCAGACAACAACTCATAAACAGTCCCTGTCCAATATGCGGTGACAAAATTTCCGGCTTCCATTACGGCATTTTCAGCTGCGAATCGTGCAAGGGCTTCTTCAAGCGGACCgtgcaaaataggaaaaattacgTGTGCCTGAGGGGGGCGGGGTGTCCCGTCACCGTCGCCACGAGAAAAAAGTGCCCCGCGTGCAGGTTCGACAAATGCCTGCAGTGCGGCATGAAGTTGGAAGCTATAAGAGAAGATAGAACTAGGGGCGGCCGCTCAACTTATCAGTGCTCGTACGCCTTGCCACCTTCGTTGACCAATCACGCCGAGTTAAGGGCCAGCTCCTCCGATTTGCGGCAAGGTGGGGAATCTCATCTCACCGTCAAGTTGGAACCGTCCGACTCTTCCATATTGCACCACAAACGAGGCAGCTTACCTGGTTCCAAGGGTGTCCCTCCGCTATTGCAGGAAATAATGGACGTGGAGCACCTGTGGCACTACAACGAAACGGAACTCAACAAATTGAGCACCGAGGGCCACCTGGGCAAGGAGGGCACCAGCGGGGCCGTCCACAATCTTTCGAATCATCCCCTGCTGGCAGGTACGGCCCTGGCGGGATCGACCGACACTAATCCCGATTTCGTCGCCAACTTGTGCAATATAGCCGATCGACGGCTGTACAAAATCGTCAAGTGGTGCAAGAGTCTTCCACTATTCAAAAACATATCCatcgACGATCAAATCTGTTTGCTGATCAACTCGTGGTGTGAGCTGTTGTTGTTTTCGTGTTGCTTCAGGTCGATGTCGACGCCCGGAGAAATAAGAGTATCTTTAGGTAAAAGTATAACTTTGAGTCAGGCGAGGGAAATGGGTATGCAGGCCTGCATCGAGAGGATGCTGAATTTCACCGAACAGCTCAGGAGGTTGAAAGTCGATCAGTACGAGTACGTGGCGATGAAAGTTATCGTTTTATTGACGTCAGACACTTCAGAACTGAGGGAAGCAGAAAAGGTGAGGGCTTCACAAGAAAAAGCCTTGAAAGCCTTGCAAGATTATACTCTGAGCCATTATCCGGATAGCCCTGCGAAATTTGGGGAGCTTCTTCTCCGCATTCCAGAATTACAGCGAACTTGCCAGgtTGGAAAGGAAATGTTGACTATCAAGTCAAAAGACGGCGATGGACCTAGTTTCAATCTGTTGATGGAACTCCTCCGAGGGGATCACTAG
- Protein Sequence
- MAADMRSPNVTVTPINMESSYPSTDLPSEGPQRTRSAPHPGLLGNGDILDTCADAEVAQIDFQCSVNMRHKKKRDGADVPRPMSWEGELSDHERDMCVDDDHGSQMPENLSLSQPKLNTLISIDSKESPILRLKQLPIGNYSIHSTPSNSPLLGQRHGLTNVPIVSHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNVHNSPLHHNVVYRSLQEDPNVQYSTEHDGLDEAEDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYALPPSLTNHAELRASSSDLRQGGESHLTVKLEPSDSSILHHKRGSLPGSKGVPPLLQEIMDVEHLWHYNETELNKLSTEGHLGKEGTSGAVHNLSNHPLLAGTALAGSTDTNPDFVANLCNIADRRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLSQAREMGMQACIERMLNFTEQLRRLKVDQYEYVAMKVIVLLTSDTSELREAEKVRASQEKALKALQDYTLSHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_01283426;
- 80% Identity
- iTF_01277954;