Basic Information

Insect: Pycnomerus fuliginosus
Gene Symbol: bab1
Assembly: GCA_963924575.1
Location: OZ004618.1:37213998-37256395[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.3e-10 2e-08 34.7 0.0 1 39 364 403 364 407 0.90

2 4 4.4e-12 6.8e-10 39.4 0.1 1 39 418 456 418 459 0.95

3 4 5.6e-18 8.7e-16 58.3 0.0 1 45 473 518 473 518 0.98

4 4 1.6e-15 2.5e-13 50.4 0.0 1 39 525 564 525 568 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.3e-10	2e-08	34.7	0.0	1	39	364	403	364	407	0.90
2	4	4.4e-12	6.8e-10	39.4	0.1	1	39	418	456	418	459	0.95
3	4	5.6e-18	8.7e-16	58.3	0.0	1	45	473	518	473	518	0.98
4	4	1.6e-15	2.5e-13	50.4	0.0	1	39	525	564	525	568	0.94

Sequence Information

Coding Sequence: ATGTCTGGTCAGCATTATTGCCTGCGATGGAACAATTACCAGAGTAACATGACATCAGTTTTTCAccaacttttacaaaatgaagCCTTTGTCGACGTAACCTTGGCCTGCAACGACCTTTCCCTTAAGGCTCACAAgGTGGTGCTCTCCGCCTGTTCGTCGTACTTCCAAAAACTGCTCCTTGAAAATCCCTGCAAGCATCCAACCATAATAATGCCGCAAGACGTTTGCTACGAAGACCTGAGATTTATCATAGACTTCGTCTACAAAGGAGAAATCGACGTTTCTCAAACTGAATTGCAGTCCCTGCTTCGGACGGCCGACCAACTGAAAATAAAAGGGCTGTGTGAACCTCCAGAAGAAAAGGAAAATTCACCACCCCAGGCCTACTCCAAGTGCGTTTCAAAGGTTAAAAAAACTCCGTCGCCCAAGCAGCTGAGATCACAGGACAATAATAGACACAAACGAAGAAAAATACACTTAGACAATAATTCGGAAAAAGATGAAAACAGTGTAGATGAGCATTCATCTGAGGAAGAAGATGATATGCCAGTGTCATTAAATGAACACAAAAGACGAGGAGTGGAACCGGAGCAAACTAATCCGCTCAACATGAGTAGTCATGGGATTATGACAGGGCAGTTTGGAGTAGATACGGACGACTTTCCTCCGGAACCACAAGCACCATCTGCCATACCCGTCGGTCATGTGGACATGCAAGAACATTCACCCACCAGAACACTCCTCACAAATTCCATTCACCGGACGGATCTCTCGGATGCCAACGTAAAATACTGCGAAATCAAAAAGGAAGCCGATATCAAATTCGAAACGTTGAGGTCCTACGACCAGGACTCCCTCTTGGAGATGGATTCGCACATGTCCGGTCCCGACCATTCGATGGACAGCCACGAAGACGACCAAAGCATGCACACTATGATGGTTACTCCCGAATTAATGGGGATGATGCCTAGCGTTTCGAATAGATTAGATTTAAGTAGCAACGAAGTACCTGTTTCGAAAAATAATGGACATTCGGAAACAATCCATCATACACCAAGGTCGCACGGGGGTGGGCCTAAAACGTGGACTCAGGAAGATATGGACATGGCCTTAGATGCTTTAAGAAATCACAATATGAGCCTGACAAAGGCATCTGCAACTTACGGTATTCCCTCCACTACATTATGGCAAAGGGCGCATAGGTTAGGAATCGACACGCCAAAGAAAGAAGGCCCTACGAAATCCTGGACTGAAGAGAACCTCAACAGTGCTTTGGAAGCGCTTAGAACCGGAACAATATCCGCTAACAAGGCCAGCAAAGCTTACGGTATACCCAGTAGCACTTTGTACAAAATCGCAAGAAGGGAGGGCATTCGATTGGCTGCGCCATTCAACGCCGCCCCCACCACGTGGACACCGGAAGATTTAGAGAAGGCGTTGGAATCAATCCGATCCGGTCAAACTTCCGTGCAAAAGGCGTCGACGGAATTCGGAATTCCCACGGGAACTCTTTACGGGAGGTGCAAGCGTGAAGGGATTGAGTTGTCAAGGTCGAATCCAACGCCTTGGTCCGAGGACGCAATGGGGGAAGCTCTGGAAGCTGTCCgACTAGGCCATATGTCCATTAATCAAGCTGCCATCCACTACAATTTGCCTTATTCATCACTGTACGGCAGATTCAAACGTGGCATAAAATACGACTCGGACAATATTGAACCCAACTCCGATAGTCAGTCGCAAATGGATGGTCATAATTTTGGAATGGAATTTACCAACACGAGCCATCAACAAATTCAATACCAAAATCAAGGAGACAGCTGA
Protein Sequence: MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYEDLRFIIDFVYKGEIDVSQTELQSLLRTADQLKIKGLCEPPEEKENSPPQAYSKCVSKVKKTPSPKQLRSQDNNRHKRRKIHLDNNSEKDENSVDEHSSEEEDDMPVSLNEHKRRGVEPEQTNPLNMSSHGIMTGQFGVDTDDFPPEPQAPSAIPVGHVDMQEHSPTRTLLTNSIHRTDLSDANVKYCEIKKEADIKFETLRSYDQDSLLEMDSHMSGPDHSMDSHEDDQSMHTMMVTPELMGMMPSVSNRLDLSSNEVPVSKNNGHSETIHHTPRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNIEPNSDSQSQMDGHNFGMEFTNTSHQQIQYQNQGDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00852594;
90% Identity: iTF_01278291;
80% Identity: iTF_01278291;