Pcon006053.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- grn
- Assembly
- GCA_963942525.1
- Location
- OZ012637.1:10924882-10953455[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-19 4.1e-16 58.2 4.7 1 35 288 321 288 322 0.98 2 2 7.8e-18 1.5e-14 53.2 6.9 1 35 345 378 345 379 0.97
Sequence Information
- Coding Sequence
- atggaTATGACATCGACGGCAGAAGCAAGCCGATGGTATGATAATCCTAGATTAGGCGGTTCTCCTAATAATGGTGGAGGACATTCGTCTGGCCACCAGCCTAGTAATAGTGTTGATGCCAATGACATGGGAGCTTTCTATGCATTAGAAAATAGTGGTCATCGTAGATATTATTCATCTGGGTATGCACCCCACgGAACACGTATGCCATCTTCGCATACATCACCACAAGTTTGTAGACCTCATCATTTTCATGCACCATTGCATCCATGGTTAAGCGAACCAAAGTCATTACCATCGGGAAGCCCCTGGGGAAGCCCGTTTGCATGCCCACAAGATCCACAAGATAAAATTAGTCAAGTACAAGGACCTCAATCCAGTGCACagcatttattttcatttcctcCAACACCACCAAAAGATTCAACACCTGATTCCGTACAAACGGGTCCAGCAGAGTATCAGgcGGCAGTAAATGCTTTTATGCACCAAGCTCAAACTACAGCTACCTCAGTGACGACATCAGAAACAAATTGTGCTCTTGATGTTAAACCAACACTATCAAATAGTGGTCAATCGGCACCCAAACAGCGTGAAGGTACGacgtcaaataataataacacaaatagtagcaacagcaacatcaataataataataatacgtcgAGCATGAATGGTGTTGGAAGTGGTAGTGGTCTATTTGATAGCAGTCATGGCTCCTATAGTCATAGTGTTTATGACACCAGTTATAACTATCATCCGGGAACTGCCGCAGCCTTTCAAAATAACACTAGACCAGTTATTAGTCCGCAAATCAAAACTCCTAGGACTAAAGCGCGAACCAGTGCTGAGGGTCGTGAATGTGTCAATTGTGGTGCAACTTCAACACCACTTTGGCGACGAGACGGCACTGGACACTATTTATGTAATGCATGCGggctttattataaaatgaacgGGCAAAATAGACCACTGATTAAACCGAAGAGAAGACTGTCATTACAAAGTGCAGCTAGAAGAGCTGGAACATCATGTGCCAAttgtaaaacaacaacaacaacattatGGAGAAGAAATCAAGGTGGCGAACCAGTGTGTAATGCTTGTGGTTTATATTACAAATTACATAATgTAAATAGAccattaaccatgaaaaaagAAGGTATTCAAACAAGGAATCGTAAATTATCGTCCAAATCGAAGAAAAAGAAAGGTCTCGGCAGTTCATGTCTACCGATTGGTGGTCATTTAGGTGGCGGAATTGGTGTAAGTGATTTAATGAAACCTCTAGATCCATCAAAATCATTTAGTAGTGGATTTTCTGCTTCAATGgGTCAACATGGCCACTTGTCGAGTGGTCTACATCCCGCACATGCGCATATGCATAGTGGGTGGTATGCCAGTGGAATGGGAGCATTAGGAGCGTCCAGTGGACTTCAAGGAGGTTTTACAACAGCTGGGTCATTGGGCAGTGGCGTTGTCCCTCATTCGCAGTCATACCACCTCGGCTTAGGTTCAATGAGCACTTGGAGATCAGACTACACATGA
- Protein Sequence
- MDMTSTAEASRWYDNPRLGGSPNNGGGHSSGHQPSNSVDANDMGAFYALENSGHRRYYSSGYAPHGTRMPSSHTSPQVCRPHHFHAPLHPWLSEPKSLPSGSPWGSPFACPQDPQDKISQVQGPQSSAQHLFSFPPTPPKDSTPDSVQTGPAEYQAAVNAFMHQAQTTATSVTTSETNCALDVKPTLSNSGQSAPKQREGTTSNNNNTNSSNSNINNNNNTSSMNGVGSGSGLFDSSHGSYSHSVYDTSYNYHPGTAAAFQNNTRPVISPQIKTPRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGSSCLPIGGHLGGGIGVSDLMKPLDPSKSFSSGFSASMGQHGHLSSGLHPAHAHMHSGWYASGMGALGASSGLQGGFTTAGSLGSGVVPHSQSYHLGLGSMSTWRSDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01276628;
- 90% Identity
- iTF_01276628;
- 80% Identity
- -