Palb005127.1
Basic Information
- Insect
- Ptychoptera albimana
- Gene Symbol
- grn
- Assembly
- GCA_961205885.1
- Location
- OY540802.1:37559994-37590322[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 3.5e-16 58.2 4.7 1 35 295 328 295 329 0.98 2 2 7.1e-18 1.3e-14 53.2 6.9 1 35 352 385 352 386 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACATCGACGGCAGAAGCAAGCCGTTGGTATGATAACCCTAGATTAGGCGGTTCACCAAATAATGTTGGAGGTCATTCATCTGGACACCAGCCTGGTGGTGTTGTTGATACTAATGACATGGGAGCATTTTATGCATTGGAAAATAGTGGTCATCGAAGATATTACTCAACAGGATATGCACCCCACGgtACACGAATGCCATCGTCGCATACTTCATCACAAGTATGTAGGCCTCATCATTTCCATGCACCATTACACCCCTGGTTAAGCGAACCAAAGTCAATACCACCTGGAAGCCCCTGGGGGAGTCCTTTTGCATGTCCTCAAGATCCACAAGATAAAATTAGTCAAGTACAAGGACCTCAATCAAGTgcacaacatttattttcatttcctcCAACACCACCAAAAGATTCAACACCTGATTCGGTACAAACGGGTCCAACAGAGTATCAGgCGGCAGTAAATGCATTTATGCATCAAGCGCAAACTACATCTACCTCAGTGACGGCATCAGAAACAAATTGTGCTCTTGATGTAAAGCCAACATTATCGAATAGTGGTCAATCAGCGCCGAAACAACGTGAAGGTACGAcgtcaaataataatagtaacacaataagtaacaacaacaacaacaacaacaacaataataataataataataataatgcatcaAGTATGAATGGCGTTGGAAGTAGTAGTGGTCTATTTGATGGCAGTCATGGCACATACACTCACAGTATTTATGATAGCGGTTATAATTATCACCAAGGTGCCGCTGCagcttttcaaaataattctagGCCGGCAATTAGTCCTCAAACTAAAACTCCTAGGACAAAAGCGCGAACCAGTGCTGAGGGTCGTGAATGTGTCAATTGTGGTGCCACATCTACACCGCTTTGGCGACGAGACGGCACTGGACACTATTTATGTAATGCATGCggactttattataaaatgaacgGGCAAAACAGACCACTTATTAAACCGAAGAGAAGACTGtCATTACAAAGTGCAGCTAGAAGAGCTGGAACATCATGTGCCAACTGTAAAACTACTACAACAACATTATGGAGAAGAAATCAAGGAGGAGAACCAGTATGTAATGCTTGCGGTTTATATTACAAATTACATAATGTGAATAGACCATTAACCATGAAAAAAGAAGGTATTCAAACAAGAAATCGAAAATTATCAtctaaatcaaagaaaaagaaaggacTTGGCTCATGTCTACCGATTGGCGGTCATCTGGGTGGTGGAATAGGTGTAAGTGATTTGATGAAACCACTTGACCCATCAAAATCATTTAGTAGTGGATTTTCTGCATCAATGGGTCAACATGGCCACCTGTCGAGTGGTCTACATCCCGCACATGCGCATATGCATAGTGGATGGTATGCAAGTGGAATGGGAGCATTAGGAGCGTCCAGTGGACTTCAAGGTGGCTTTACAACAGCCGGGTCATTGGGTAGTAGCGTTGTTCCTCATTCGCAGTCATACCACCTCGGCTTGGGTTCAATGAGCACTTGGCGATCAGACTACACATGA
- Protein Sequence
- MDMTSTAEASRWYDNPRLGGSPNNVGGHSSGHQPGGVVDTNDMGAFYALENSGHRRYYSTGYAPHGTRMPSSHTSSQVCRPHHFHAPLHPWLSEPKSIPPGSPWGSPFACPQDPQDKISQVQGPQSSAQHLFSFPPTPPKDSTPDSVQTGPTEYQAAVNAFMHQAQTTSTSVTASETNCALDVKPTLSNSGQSAPKQREGTTSNNNSNTISNNNNNNNNNNNNNNNNASSMNGVGSSSGLFDGSHGTYTHSIYDSGYNYHQGAAAAFQNNSRPAISPQTKTPRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGSCLPIGGHLGGGIGVSDLMKPLDPSKSFSSGFSASMGQHGHLSSGLHPAHAHMHSGWYASGMGALGASSGLQGGFTTAGSLGSSVVPHSQSYHLGLGSMSTWRSDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277347;
- 90% Identity
- iTF_01277347;
- 80% Identity
- -