Basic Information

Insect: Ptychoptera contaminata
Gene Symbol: RREB1
Assembly: GCA_963942525.1
Location: OZ012637.1:997184-1003202[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00027 0.018 15.4 0.4 1 23 239 261 239 261 0.98

2 14 0.0017 0.11 12.9 0.1 1 23 272 294 272 294 0.98

3 14 1.1e-05 0.00075 19.7 7.2 1 23 300 322 300 322 0.99

4 14 4.3 2.8e+02 2.2 1.5 1 23 459 483 459 483 0.88

5 14 0.16 10 6.7 4.4 2 23 489 511 489 511 0.94

6 14 4.9 3.2e+02 2.0 0.5 1 11 555 565 555 575 0.84

7 14 0.023 1.5 9.3 0.1 1 23 722 744 722 744 0.97

8 14 3.1e-05 0.002 18.4 0.9 1 23 753 775 753 775 0.99

9 14 0.00045 0.03 14.7 2.0 1 23 781 804 781 804 0.97

10 14 0.00092 0.06 13.7 2.1 1 23 1167 1190 1167 1190 0.95

11 14 8.9e-05 0.0059 16.9 0.4 2 23 1464 1485 1463 1485 0.97

12 14 0.14 9.2 6.9 6.3 1 23 1491 1514 1491 1514 0.97

13 14 0.0081 0.54 10.8 0.5 3 23 1689 1709 1687 1709 0.96

14 14 0.0043 0.28 11.6 5.1 1 23 1715 1737 1715 1737 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00027	0.018	15.4	0.4	1	23	239	261	239	261	0.98
2	14	0.0017	0.11	12.9	0.1	1	23	272	294	272	294	0.98
3	14	1.1e-05	0.00075	19.7	7.2	1	23	300	322	300	322	0.99
4	14	4.3	2.8e+02	2.2	1.5	1	23	459	483	459	483	0.88
5	14	0.16	10	6.7	4.4	2	23	489	511	489	511	0.94
6	14	4.9	3.2e+02	2.0	0.5	1	11	555	565	555	575	0.84
7	14	0.023	1.5	9.3	0.1	1	23	722	744	722	744	0.97
8	14	3.1e-05	0.002	18.4	0.9	1	23	753	775	753	775	0.99
9	14	0.00045	0.03	14.7	2.0	1	23	781	804	781	804	0.97
10	14	0.00092	0.06	13.7	2.1	1	23	1167	1190	1167	1190	0.95
11	14	8.9e-05	0.0059	16.9	0.4	2	23	1464	1485	1463	1485	0.97
12	14	0.14	9.2	6.9	6.3	1	23	1491	1514	1491	1514	0.97
13	14	0.0081	0.54	10.8	0.5	3	23	1689	1709	1687	1709	0.96
14	14	0.0043	0.28	11.6	5.1	1	23	1715	1737	1715	1737	0.99

Sequence Information

Coding Sequence: atggAGAGAACAACACGTAGCACAATGAGACGTATGACACGGGGAAATTCATCAAcagcatCAAGCATTGAACGCCGGTCATCAACAAATAGTGAAGCATCATCAATTGAACCAATGGACATAAGTAcatcaaataaaacattaagttCAATTGATGACAATAATACttcattgattttaaatataaataaaaataaaaaacatattgacAATGAATCAGATGATACAAATGATGATGAACGTACAACCGaacatgatgatgatgacgaacATGATCatgatgatgaaaataatattattgataataatttatccgagaataataatcatgaaaatgaatataatcaTACAAATATATTAAGGCGTAAAAATTTACGTtcaattgataataatgatggTGGTATGTTAATGATGCGTAAAAGATTACGCTTAAATTCATTACAACAGCATCAAGATACAGCATCGATAATAACAGCCGCACAGGCAACTGatttaatagttaaaaaagaTATTGATTCTGAGGAAGACACAATATTACAACCAACATCGACTTTATCAacgaaattaaacaataataataataataataataataataacgttagtaaaaatttaaataataataatattaatgaatcaACAATTCAACAACAAATACCACAGCATACAGatcatgataataatataaataataataataataacgatataaaatatatatgtccAATATGTGAAATAATATCGACAACTCAACACGATTTCACTGAGCATATACGCagccataataataatggtaatgATAATACACAAAATTTTACCTGTCGTATATGTTTAAAGGTTTTATCATCAGCATCGTCATTGGATCGTCACGTTTTGGTGCACACAGGTGAACGGCCATTTACATGCAAATATTGTCATGTAACATTTACAACAAATGGTAATATGCATCGTCATATGCGAACGCATAAACATCATCGTGATTTAGGGGGTGGTGGTAATAGTGGAGGTGGCGGAAGTGGAGGCGGCAGTGGAAGTgggaatggtgaaaattatgaaagtGATGTATCTACTGATTCAAGTGCTAGTAGCTGTGGTATTGGCAATAGTTCAATTGgaggcaataataataataatttaaattacaataataatttaaacgaacgtttaagaaataataataattacaataatcgTTTAGATAGTAAACGTAAAAGTATTGATGATGACGATATTCGGCGCCGAATCAAAACATTTtggaataataacaataataataataataacaaaaataacaataacaataataataataataacaataacaccaataataataatttaaatgcaacTAAGCAAATAACAATACCTCCAAGATTTTGTTGCCCAATTTGTCGCCGTAATGATTTCTCAAATATGTTAACTTTAGAAAATCATATGGATAAGGAGCATCCAGATGTACAAGCAAAATGTCGCCATTGTGAAGTATTTTTCAAAAGTTATAAAGCATTAAATGCGCATCGTTGTGGTCTTCATTCTAAACCACCTGGTGTTCGTTTAGGCTTTAACGACATGacattcattgatttttcaaGTGAGAAATTTCCATTGATTGCACGTTCAATGTGCGAACAAAGTATGCGGACACCAATAACGAATCAAAAATATGAATGTACTAAATGTTATCGTGCATTTCCATGTTCAATAGCTGCGGAAATACATATGACAGATTGCGGTAAATTTGGGAGCACTATACAAGATTTCTCAAATGCAGCAAGACGTCAACGACATTCAAGCGAAACATCAGAAGAAGATACAAAACGTGACATGTTTTTAGCCAATTTTGATTTGCAGAACAAATCCATGGTATCAAATTCATCAACTTTAGACACTATGAGCAGTCATGCTGGATCACCTACATTTCCTACCACTCTCTTAGATCATAATGAATCAGAAACATCATCTATGAATCATAACGATTCAAAAGACTTGGCTGATATTCAATCGATTCTTAATATAACATCGTCATCACAAGGATTTTTACGACAATTGGATAAACCGTTATCTTTGAAAGATTCGCCACAATCTGGTGGAGGTCGTGATAATGAGGAAGAAGCTCAAGATGCATTTACGTCTGaatttagaaaaatgaaattacgAGGAGAATTCCCCTGTAAATTATGTACTGCAATTTTTCCAAATTTGCGTGCTTTAAAAGGACATAATCGTGTTCACTTAAGTTCGGCCGGCTCTGGTCCATATCGTTGCAACATGTGTCCTTATTCTATTCATGACAAAGCAGCGCTAATTCGTCACATGAGGACACACAATGGGGACAGACCTTACGAGTGCGCAATCTGCAATTATGCTTTTACGACAAAGGCGAATTGTGAGCGACATTTACGAAATCGTCATTCCAAAACAACACGAGATGAAGtcaaaaagaatattatctATCACCCATCAGAAGATTCTAGTGTAGaacatatttcaaataaaatgccAATTTTAGGTTCGCCGGATTTTGAAACAGATGATGATCATATTACACCACGAGACCGTAGTACACCCGTGTCACATTTACAGGAAATGCTTTTTCCAACTACCGAGAAACCAGCAAAAATACAAGTTAAAAGCTTGGCAAAATTAATTCAACCAATTAAGTTTGAAACACCTGAGCCCGAACCAGAACCAAAATTACCCGAACATGAACTTGAACCAATTGTACAAGATATTAAGCCAATAGATTTAAGTATGGATGCTCTTGATTTGAGCAGAAAGAATAAACCATTATTTGTGGAAGAAAAGGAAGAGGAAGATTTGCCGAGTCCAAAACTTCCCGATTTATCGTTGCTtgagaaaaatcaacaattatttttcatgcaACAACAATTACTGAACGGAGGACTGCCAAATGTTGATCCAGCTCATTATATTCAATTACATCAATTATATCGCAACTTAGTATTTCCTAGTGCTGGATTTCCCTTGCACCATTTCTTATTGCAAAATTCTTTGTTGCCACCAGCTGGGTTTGCTGACATTAAAGATTTATTCTCCAAAGATTTGTTACGTGCCCCCCAAATGTCTGGTGGAAGTATGATGATGAATCCTATATTTACACAACGACCACCATCACCTTCATCATCTCAAACACAActtcagcagcagcaacagcagcagcaacaacaacaactgcAAGATCAACATCAACGCcaacaacaagaacaacatCATAGACAAAGAGAACGGGAATCACACTCCCAACCACCTCCAAGATCAGCATCGCAACCACCTCCAGCGTTAAAACAATTAGAGACTCCTAACAAACAAAATCGTGATTTTTCTATGAATAGTTCTGCAACAAGCACACCAAAACACAATCATTCCACACCAACCTCGCAACATCAGTCTCATAGTCCTGGCCCAGttaaaatggtaataaaaaatggaGTTCTTATGCCAAAGCAAAAGCAACGTCGCTATCGTACTGAGCGGCCGTTCGCTTGTGAACATTGCTCAGCAAGATTTACGTTGCGTTCAAATATGGAACGTCATATTAAACAGCAACATCCACAATATTGGGCGCAACGACAACGCGGTGGCCACAGTCTAATGCGCCGTGGTGGTGGTGGATCTAACAATAATCATTCAGCTTCACCAGTTGCACCACCCATGACTAACAACTCATTTGGAGCAATTTCAGATCAAGTAAAATACGCAATTCTAGCTCAACAACTTAAACAACAAACTAGCCCAAAGTTGCCGCATAATTCAAATCGCACAAGTCCATTAGGACAGCAACAGCATATTTCACATTCTGCTGTTCCGCCACGTACTAATAGTAACAGTACGCCAAGTCCCCAAGATGATGATGAACCGCAATTGGTTATTGATGAAGACTCTCAACCAGAGGATTTATCAAAATTGGAAAATTCGCCAGCGCATACACGTGCCGAAAGTGAGGAGAGAATCATGGTAGCGAAAAAGGTTGCAGAAAACATTTTAGAGCAAGCAAAAAGTGCTGCAGCAGCTGCCTCTGATACAACGACGAATAACATATCAGCATCGTCAGACGTGAAAGATTTTGATATGAAAATTGGtacaaatttgataaaaaaaaaattggataataatttgatggtaaaacattttaataatgaaaattcatcCGGCAAAGAAGAAGTCGACTTGGTGTCTGTAAcgaaattagttaataatgcGTATGGATATTATTTCCAttCAGAACCAGTTAATGTCGACCATAGTGATGAGGAAGGATTAGTAGCATCGGGAAGTGCATCAGAGAGTAACAACTCTGGTACAGAAGACCCTAGTCCACcatttaatcaaaagaaacGTTCTGCCTATAGTTTGGCACCAAATCGCGTTTCTTGTCCATACTGTCAACGTAAATTCCCTTGGTCAAGTTCCTTGCGACGTCATATTTTAACACACACTGgacaaaaaccatttaaatgcTCTCACTGTCCATTGTTATTCACAACAAAAAGTAATTGCGATCGTCATTTGCTAAGAAAGCATGGTGATGTTGAGTCAGCCATGTCCTTATCAGTTCCAATTGAAGACATTCCAGAACCAAAACGGGAAAAAAATGTCCCACCATCGCCGCCACCACCACAACAACAACCACCACAAGTACAGCCACCACAACCACAGCCAAATTCTCAACCAATTCCGGAGAAGGAAATTTCACAAATTAAGGAAGAACGATCAAATATTTCTGCTAATTTATcagcattaaattttaatttgggATCCGGATTAGGACTGAACATTCCAATGCTAAAATCGGAgactaattttcaattatctgGGCCTGATCTACCATTTAAATGTCATTTGTGTGATTGTTCATTTTCCGAAAGAATGCAGTGTCTAGAACATATCAAACACTTGCACATTCAGGAATTTGcattattaatatcaaaagGAGCCATAGAACCTGAACCAACGCCATTATCACAAATGCAATTAAATGCTGACGAAGATGATAAAATTGATGCTAAAGGCAAATATCCAGATTACACAAATCGCAAGgTAATTTGTGCATTTTGTGTTCGTCGATTTTGGTCAACAGAAGATTTACGTCGTCATATGCGTACACACTCTGGTGAACGACCATTCCAATGTGATATATGCTTACGTAAATTCACATTAAAACATAGCATGTTGCGTCATCAAAAGAAGCACAACAGTCACAATAATAgccaattaaataatgtaaatagtgGCTCTGATATGTCTGACGATGAAACAACGACAAGTGTTCCTGGTGTAACATCATTATCGCAACAACCAACCGCTcagcaaatattaataatgcaacagcaacatcaacatcaacaagcattaatgaaaatgaatttaaatatatcaCGATCAAGTGAAAAAGTACCAAATTCATGGCGTACAAATGCAAATAATACTGCTGCAATTACTGaagaacatttaaataaattaaacaataataatataaatattaataataataatttaagtaataataataataataatattagtaataataataatacaaatataattaaaacggAAAAAGATAGTAATGACGTTGAATCTGATCTAATTGGTAATCTATTAGGTATAAGTGATCAAGGTATATTAAACCGTGTTTTGCATTCATCAGCCGATGAAGCTGCTAAATTATTAGGTGTtgataagtaa
Protein Sequence: MERTTRSTMRRMTRGNSSTASSIERRSSTNSEASSIEPMDISTSNKTLSSIDDNNTSLILNINKNKKHIDNESDDTNDDERTTEHDDDDEHDHDDENNIIDNNLSENNNHENEYNHTNILRRKNLRSIDNNDGGMLMMRKRLRLNSLQQHQDTASIITAAQATDLIVKKDIDSEEDTILQPTSTLSTKLNNNNNNNNNNNVSKNLNNNNINESTIQQQIPQHTDHDNNINNNNNNDIKYICPICEIISTTQHDFTEHIRSHNNNGNDNTQNFTCRICLKVLSSASSLDRHVLVHTGERPFTCKYCHVTFTTNGNMHRHMRTHKHHRDLGGGGNSGGGGSGGGSGSGNGENYESDVSTDSSASSCGIGNSSIGGNNNNNLNYNNNLNERLRNNNNYNNRLDSKRKSIDDDDIRRRIKTFWNNNNNNNNNKNNNNNNNNNNNNTNNNNLNATKQITIPPRFCCPICRRNDFSNMLTLENHMDKEHPDVQAKCRHCEVFFKSYKALNAHRCGLHSKPPGVRLGFNDMTFIDFSSEKFPLIARSMCEQSMRTPITNQKYECTKCYRAFPCSIAAEIHMTDCGKFGSTIQDFSNAARRQRHSSETSEEDTKRDMFLANFDLQNKSMVSNSSTLDTMSSHAGSPTFPTTLLDHNESETSSMNHNDSKDLADIQSILNITSSSQGFLRQLDKPLSLKDSPQSGGGRDNEEEAQDAFTSEFRKMKLRGEFPCKLCTAIFPNLRALKGHNRVHLSSAGSGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHSKTTRDEVKKNIIYHPSEDSSVEHISNKMPILGSPDFETDDDHITPRDRSTPVSHLQEMLFPTTEKPAKIQVKSLAKLIQPIKFETPEPEPEPKLPEHELEPIVQDIKPIDLSMDALDLSRKNKPLFVEEKEEEDLPSPKLPDLSLLEKNQQLFFMQQQLLNGGLPNVDPAHYIQLHQLYRNLVFPSAGFPLHHFLLQNSLLPPAGFADIKDLFSKDLLRAPQMSGGSMMMNPIFTQRPPSPSSSQTQLQQQQQQQQQQQLQDQHQRQQQEQHHRQRERESHSQPPPRSASQPPPALKQLETPNKQNRDFSMNSSATSTPKHNHSTPTSQHQSHSPGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRGGHSLMRRGGGGSNNNHSASPVAPPMTNNSFGAISDQVKYAILAQQLKQQTSPKLPHNSNRTSPLGQQQHISHSAVPPRTNSNSTPSPQDDDEPQLVIDEDSQPEDLSKLENSPAHTRAESEERIMVAKKVAENILEQAKSAAAAASDTTTNNISASSDVKDFDMKIGTNLIKKKLDNNLMVKHFNNENSSGKEEVDLVSVTKLVNNAYGYYFHSEPVNVDHSDEEGLVASGSASESNNSGTEDPSPPFNQKKRSAYSLAPNRVSCPYCQRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAMSLSVPIEDIPEPKREKNVPPSPPPPQQQPPQVQPPQPQPNSQPIPEKEISQIKEERSNISANLSALNFNLGSGLGLNIPMLKSETNFQLSGPDLPFKCHLCDCSFSERMQCLEHIKHLHIQEFALLISKGAIEPEPTPLSQMQLNADEDDKIDAKGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHQKKHNSHNNSQLNNVNSGSDMSDDETTTSVPGVTSLSQQPTAQQILIMQQQHQHQQALMKMNLNISRSSEKVPNSWRTNANNTAAITEEHLNKLNNNNININNNNLSNNNNNNISNNNNTNIIKTEKDSNDVESDLIGNLLGISDQGILNRVLHSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01276475;
90% Identity: -
80% Identity: -