Basic Information

Insect: Ptychoptera contaminata
Gene Symbol: Hr39
Assembly: GCA_963942525.1
Location: OZ012636.1:28301963-28305389[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.053 4.5e+02 -0.1 3.8 73 160 151 243 93 256 0.58

2 5 0.051 4.3e+02 -0.0 8.4 46 177 280 414 258 421 0.71

3 5 6.5e-09 5.5e-05 22.7 0.0 1 26 483 508 483 519 0.89

4 5 0.00094 8 5.7 0.0 68 133 518 584 503 599 0.59

5 5 2.3e-69 1.9e-65 221.8 2.7 153 383 537 781 531 793 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.053	4.5e+02	-0.1	3.8	73	160	151	243	93	256	0.58
2	5	0.051	4.3e+02	-0.0	8.4	46	177	280	414	258	421	0.71
3	5	6.5e-09	5.5e-05	22.7	0.0	1	26	483	508	483	519	0.89
4	5	0.00094	8	5.7	0.0	68	133	518	584	503	599	0.59
5	5	2.3e-69	1.9e-65	221.8	2.7	153	383	537	781	531	793	0.84

Sequence Information

Coding Sequence: ATGGCCGCAACCGGTGGGGGTGGTATTACTACAAGTTTGGGACGCGGAAATAATATATCAGtgacaaatattaattgtgaTAATACGTTATCTACATCATCGTTAAATTGTGTAAATGAAATATCAAATGACTGCAATGTAAGTGGAATAGTGCCAGTGACTACACAACTAATAGCATCAACAAATATGAACCAATTTTATGGAAATAGCGATATAATACAGGCATCGGGAAATAATAGTGGAAGTAGTAATCCAAATTTACTTGGTATTAGAATTACTGTTCCAAAAATGGAAGAATCTGATGAATCTGATAATGAATTatcaaatattgaaaaatcagtaattaataatattaaaaataccaacaataataaatttaataaaaatatgcaaagGCCAATGTCATGGGAAGGTGAATTATCCGAAATTGAAGATATGATGGATATCGAGAATACACAACAATCATGCCCGTCAGCGATAACAATACCAATATCGTCGGAAGCAACAATTAAACAAGATACAGGGGATCTTaaatattccaaaaaaaaaaataacgattcAATTTTATCAATACAACAGAATAATGAGAAGCAATTATTATTGGATGAAGTAATAAAACCCGAATATCATACAAATGATACTCAAGAATCAATTATCAATTCATCACATCACACATTATTTTCATCAGCCGGACAATCAACAAATTTACACCAATTAtcttttaatagtaaaaaatatactgatttaattaatttaaaatatgagCCAGGACTGCAACCCCAGCAATCACCAGATATAACAACCAATGTACATTCACCACTTTTAGTAAGatctaaaacaaatttattaccaGCGAATCCCAGTCCTGATTCAGCAATTCATTCAGTATATACACATAGTTCACCAAGTCAATCGCCATTAACATCACGGCATGCACCATATACGCCAACATCATTAAGTCGCAATAATAGTGACGCGTCACACAGTAGTTGCTTTTCATATAGTTCTGAGTTTAGTCCAACGCAATCGCCAATTCAGGGGAGGCATATATACGGCAACAGCATGTATAATGGGTCTCCGTTGCACCATTCGGTTTTATATCGACCAATGGTAGAAAGTAATGATCCAACATTTTTGCGAATGCAAAATTCCCATTTAACAACAGAAGACGGAACAATAATTGAAAGCGAAACAATACCTTCCGCTGGTATTTCAAGgcaacaattaattaacagtccaTGTCCAATTTGTGGTGATAAAATATCTGGATTTCATTATGGAATATTTTCATGTGAATCTTGTAAAGGTTTTTTTAAACGCACCGTTCAAAAtcgaaaaaattatgtttgtttgcGTGGTGCTGTATGTCCTGTGACCATATCTACTCGAAAAAAGTGCCCAGCATGCCGGTTTGAGAAATGCTTACAACGTGGCATGAAATTGGAGGCAATACGTGAGGACAGAACACGGGGTGGTCGATCAACATATCAATGTTCATATACATTACCGAGTTCTTTGTTAAATCCAAATATAAACTTAGAACaacataatattaatcaaCGATTACAATCAAATGAACCATCATTAAAGGCTGAATCACAGGATAATAGTAATAGTTGCAGCAGTAATGGGGCAAACACCAGAATGGGAATACCATCATTATTACAGgaAATTATGGATGTAGAACACCTATGGCAGTACAATGAAGCAGAATTATCACGATTAAATCAACCAGCCAGCTTATCAGGAAATCGCAGTCAATCGGTATCAAATAATTGTTCAGTGACAAATCCACTATTAGCTAATGCTGGATTAAATAATAGTTCAAATCCTGATTTAATAGCAAATTTGTGCAATATTGCCGATCATCGCTTATACAAAATTGTGAAATGGTGTAAAAGTTTgccattgtttaaaaatatatctattGATGATCAAATATGTTTACTTATAAATTCATGGTGtgaattactattattttcttgttgttttcgtTCAATTTCATCACCTGGAGAGATACGTATCTCATTGGGTAAATCTATAACATTAGCGCAATCTAAAACAAGTGGTTTACAGGCATGTATTGAAAGAATGCTAAATTTGACAGATCATTTAAGAAGACTACGTGTAGACAAATATGAATATGTTGCTATGAAAGTGATTGTCCTATTACAATCTGatactTCGGAATTAAAGGAATCAGAAAAAGTACGTGCTAGTCAAGAAAAAGCATTACAGGCGTTACAGGCATATACATTAGCACATTACCCAGAAACGCCAGCTAAATTTGGTGAACTATTATTAAGAATACCGGAGTTACAAAGAACTTGTCAGGTAGaAAATGTAATGGTATCACACGCGGATGACCCAATGCCATTAAAGTGGCCATTTCAGTACAATAATGATCCAAATCATACAGCAAATTccgaaaaaattattgtaatgaaTTGGCTAGCTCAATCTCCTGATCTCTATcccatagaaaatttatag
Protein Sequence: MAATGGGGITTSLGRGNNISVTNINCDNTLSTSSLNCVNEISNDCNVSGIVPVTTQLIASTNMNQFYGNSDIIQASGNNSGSSNPNLLGIRITVPKMEESDESDNELSNIEKSVINNIKNTNNNKFNKNMQRPMSWEGELSEIEDMMDIENTQQSCPSAITIPISSEATIKQDTGDLKYSKKKNNDSILSIQQNNEKQLLLDEVIKPEYHTNDTQESIINSSHHTLFSSAGQSTNLHQLSFNSKKYTDLINLKYEPGLQPQQSPDITTNVHSPLLVRSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPTSLSRNNSDASHSSCFSYSSEFSPTQSPIQGRHIYGNSMYNGSPLHHSVLYRPMVESNDPTFLRMQNSHLTTEDGTIIESETIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAVCPVTISTRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPSSLLNPNINLEQHNINQRLQSNEPSLKAESQDNSNSCSSNGANTRMGIPSLLQEIMDVEHLWQYNEAELSRLNQPASLSGNRSQSVSNNCSVTNPLLANAGLNNSSNPDLIANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISSPGEIRISLGKSITLAQSKTSGLQACIERMLNLTDHLRRLRVDKYEYVAMKVIVLLQSDTSELKESEKVRASQEKALQALQAYTLAHYPETPAKFGELLLRIPELQRTCQVENVMVSHADDPMPLKWPFQYNNDPNHTANSEKIIVMNWLAQSPDLYPIENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01276298;
90% Identity: iTF_01277016;
80% Identity: iTF_01277016;