Pcon008288.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- dmd-4
- Assembly
- GCA_963942525.1
- Location
- OZ012637.1:38024425-38028460[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-24 1e-20 73.3 12.8 1 47 67 113 67 113 0.98 2 2 3.3 1.4e+04 -4.0 1.3 3 8 343 348 340 350 0.68
Sequence Information
- Coding Sequence
- atgctgccagcaaattgtttaataaataatttagataattCAAGTACAGTAAATAGTGTTCTACCAACAACTGGTACAACAATAACACCATTGTGTGGCGGTGCTACTagtgttaatttaacaaataaaacaaataaaattcataataataacaataataataataataatattaataataaatatttaaataatcctCGTATACCAAAATGTGCACGTTGTCGAAATCATGGAATTATATCCGGTTTACGTGGACATAAAAAACACTGTACGTACAGGAATTGTCGTTGTGCTAAATGTGAATTAATACATGAAAGGCAAAGGATTATGGCAGCTCAggtTGCCTTGAAACGACAACAAGCAGTTGAGGATGCAATAGCATTACGATTAGCCTCAAATGAGACGGGAACATCTATGAATACACTGCCACCGGGCAAAATATTTGGTATGACTGTCACAGATCCATGTATTACGCCACCATCGCCACAGGCATCACcaaccaacaacaataataataataataataaaaccaccaATGATGAAAAACTTAAACAAAGTGaatCCCCAGTTCTGACAAACCCAGTTGTGGATACGAAGAGCCCAACGATAACAACAATTCAAAAATCAACACCGCCACCACCATCACCAAAAGCGCCATCAACACCATCCACATCTATTGcatcaccaccaccaccaccgccTACAACAAACGTTTCTCAAAGTGCTATCGATATGCTGGCACAGTTATTTCCTCATCGAAAACGTTCGGTATTAGAATTGGTACTCCGACGTTGCGATTTAGATTTACTGCGTGCAATTGAACAATGCAGTCCAACACCAAGTGCATTTCGTCCGCCAATAACCAGCCagaTGTCTTCAATTACGacacaacagcagcaacagcaattaCAGCAACCAACTCCATCGCATTATACATCGTTAATAGCTTATCCAAAATGGTTATTGCCAATGTCAATTCCAGTAACAATGGgacatttacaaaatttagcGCCTAGATGTACACTACCAAATTGTCCAATGTGTTTACATTCAATGTAA
- Protein Sequence
- MLPANCLINNLDNSSTVNSVLPTTGTTITPLCGGATSVNLTNKTNKIHNNNNNNNNNINNKYLNNPRIPKCARCRNHGIISGLRGHKKHCTYRNCRCAKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNETGTSMNTLPPGKIFGMTVTDPCITPPSPQASPTNNNNNNNNKTTNDEKLKQSESPVLTNPVVDTKSPTITTIQKSTPPPPSPKAPSTPSTSIASPPPPPPTTNVSQSAIDMLAQLFPHRKRSVLELVLRRCDLDLLRAIEQCSPTPSAFRPPITSQMSSITTQQQQQQLQQPTPSHYTSLIAYPKWLLPMSIPVTMGHLQNLAPRCTLPNCPMCLHSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01276285;
- 90% Identity
- -
- 80% Identity
- -