Pnig033271.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- dsx
- Assembly
- GCA_947425015.1
- Location
- OX380337.1:8745567-8746037[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-24 4e-20 72.9 13.5 2 47 25 70 24 70 0.97 2 2 0.45 8.1e+03 -1.7 0.1 21 27 145 151 141 152 0.83
Sequence Information
- Coding Sequence
- ATGTCTTCGGAGGAAGCATACGACATGAAGATGGAGTTAAACGCGTCGAGTACATCCTTGACGCCACGCACGCCCCCGAATTGCGCCCGTTGTCGCAACCACAGAATGAAGATCGCTCTTAAAGGCCACAAGCGCTATTGCAAGTACCGCACGTGTAAGTGCGAGAAGTGTAAACTGACGTCGGAACGTCAGCGAGTCATGGCGCTTCAGACGGCGTTGCGACGCGCCCAGGCGCAGGATGAAGCCATGTTGGGCTCCAGGCCTAGTGGGCTCCTGCCCAGGCCCTTGTCTCCTGCGCCCTCGCCCTCCCCCGCGGCTCTTGTCGCCGTGGATATGGATAAGCTGGAGTGTGATTCCCCGGCACCGTCGCATTGCTCCACGTCAAATAATGTCAGGAAGATGACACCTGATCACAATGCCGTACATATAGGTAAGTACACATGTCCTTACCAACACTTCAATACCATTTAA
- Protein Sequence
- MSSEEAYDMKMELNASSTSLTPRTPPNCARCRNHRMKIALKGHKRYCKYRTCKCEKCKLTSERQRVMALQTALRRAQAQDEAMLGSRPSGLLPRPLSPAPSPSPAALVAVDMDKLECDSPAPSHCSTSNNVRKMTPDHNAVHIGKYTCPYQHFNTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00768322;
- 90% Identity
- iTF_00028777;
- 80% Identity
- -