Pnig043093.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- dmd-4
- Assembly
- GCA_947425015.1
- Location
- OX380335.1:15655815-15663662[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-25 1e-20 74.9 10.9 1 47 11 57 11 57 0.98 2 2 0.026 4.7e+02 2.3 0.8 29 35 260 266 258 272 0.86
Sequence Information
- Coding Sequence
- ATGCCCGCCAACGTAGCATCGAGAAGTGCCCGAGTGCCTAAATGCGCTCGTTGCAGAAATCACGGAATGATTTCTAACCTGCGAGGACATAAGAAGATGTGTGCGTACAAGAATTGCTTGTGTCCGAAGTGTAATCTTATTAAAGAGAGGCAGAGGATTATGGCTGCACAGGTGGCTTTGAAGCGACAACAAGCAGCAGAAGACGCAATCGCTCTGCATCTAGCTTCTGCCGAAAGTGGTACAAATTACGAATACCTACCTCCAGGTCGCATCTTCGGCATGCAAGTCACATCACCTTGTCCCATTCCTCACGAACAAAGCTCGTCTCCACCTGCCACAGACACCACTGAAGAAGTCAAAGAAAAACCACCAGCCGTCGAAACTCCCCAAGAAAAAGAGCCGCAAGTATCAAAACCAGAAGTTGTTGTCAGTCCTGCTTCCATTGAAATGCTTAGCAAACTGTTCCCTAACAAGAAACGAGCTGTGTTGGAGCTGGTTTTAAAGAGATGTAACCATGATTTACTTAAAGCCATTGAACATTTTAATGCGAAAAGTAATCAAGTATCGTCAGATGTATCTATTCCGGCTCATAGTTCTGCTTTTAAACCAGTGGCAAATAAAAATGTTAAAATACTCCCAACAGGAACGCATCCAAGTGCTACGATTCCTATTTTAGCAGGGAGTAAAGTATTTATGCATAATTTTTATCCGTTTTTACCGTTGTTTAATCCGCAACCACAACTTTTGCAAAATCCTGCTGTGTACGTTCCTGGGTTATGCGAATGTGACCAATGTAAACATGGTATCTACACCAGGCTGGATCAAAGACCTTGA
- Protein Sequence
- MPANVASRSARVPKCARCRNHGMISNLRGHKKMCAYKNCLCPKCNLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTNYEYLPPGRIFGMQVTSPCPIPHEQSSSPPATDTTEEVKEKPPAVETPQEKEPQVSKPEVVVSPASIEMLSKLFPNKKRAVLELVLKRCNHDLLKAIEHFNAKSNQVSSDVSIPAHSSAFKPVANKNVKILPTGTHPSATIPILAGSKVFMHNFYPFLPLFNPQPQLLQNPAVYVPGLCECDQCKHGIYTRLDQRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00469676;
- 90% Identity
- iTF_01225708;
- 80% Identity
- -