Pnig030873.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- DNAJC1
- Assembly
- GCA_947425015.1
- Location
- OX380352.1:237414-241923[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-06 0.014 17.0 0.0 2 38 293 332 292 340 0.87 2 2 1e-08 2.2e-05 26.0 0.1 3 44 384 429 383 431 0.90
Sequence Information
- Coding Sequence
- ATGTGTAATTATTTAAAATGTATTTATTTTCTTACAACAATTTTATTGATTGTTACATCAGTAAACGCCTGGGACTCAGACCAACTAGAAATTTTCGATTTAGTCGAAGAAATAAATCAGAATTTTTACAATGTTCTAAATATTACTCAGGATGCTGATGCAAAAGATATAAAAAAAGCTTTTCGAGCACTGTCGTTGGTATTACATCCAGATAAAAATGATGCAGCAGATGCCGAAGTACGTTTTCGACAAATGGTGGCAGTTTATGACGTTTTAAAAGACCCAAATAAACGTTCTCATTATGATGATGTTCTTAAAAATGGACTGCCAAACTGGCGCTCTGCTGTTTATTATTATAGACACGTTAGAAAAATGGGTTTGGCAGAAACTTTACTTACTTTATTTATTGTTATCAGTATTGGTCAATACTTAGTAGCTTGGGGATCGTACATTGAAGAGAAATATAAAGCCGAGCAGAAGTATGAAGCTAAACTAAAAAAAGCCACAAGAAAACGTGGCATTGATGTAAGTCTCCAAATTCAAGAGCTGGAAGAAATGCGACTTATTCCAAAACCATCCTGTTTAAATACACTTCCAATACAAATACCAAAATTTCTTTGGTTTATTCTAACAAATATAGTTCCTTTTACTCGATTTATTATCGAGACGACTAAAGAATCCTACCAAAGAAGGCAAGATGTTGAAGAATCATCCTCAGAGGAAGAGGAAACACAACAAAATCTTCCTCAACTCCGAAGAAGAAAGAAACCAGGATTTGTTCCAGTAGAAAGAGATGAGAATGAACTTCCACAGAGGTTGGTTCATTTATCACCAGCCTCTGAAGACGCTTCCATTAGTTCAGTACCAATCAGTGGAGGTCTTTGGACGGACGATGATTTGGGAGAATTGTGCCATTTGGTGAAGAAGTATCCTGGGGGGACGATAGATCGCTGGGATAAAATTGCAGACACTATGAACAGAACTGTTGCTGAAGTGACATATATGGCTAATAAATTGAAAGATAATAATTACAAACTTCCAGGGCAAGATGAGCCCACTCCAGAGGTAGAGCCCCCTAAAAAACAAAAAACCAGAGGTGGTAAGCTCCCGAACGAAAGCCCAGACGCTTCCAAATCATCTCCAGCAGCAAACTGGAGCCAGATACAACAAAAATCCTTAGAAGCAGCTTTGGCAAAGTACCCAAAGGGCCCAACAGACCGCTGGGAGAAAATTACAAAATGTGTTCCTGATAAAACGAAAGAAGAATGCATGTTGCGGTACAAATATTTAGTTGAATTAGTAAAGAAACAAAAAGAAAAGAAAGAAAATGATATTGAAGATGGTGACACTTTGGAATAA
- Protein Sequence
- MCNYLKCIYFLTTILLIVTSVNAWDSDQLEIFDLVEEINQNFYNVLNITQDADAKDIKKAFRALSLVLHPDKNDAADAEVRFRQMVAVYDVLKDPNKRSHYDDVLKNGLPNWRSAVYYYRHVRKMGLAETLLTLFIVISIGQYLVAWGSYIEEKYKAEQKYEAKLKKATRKRGIDVSLQIQELEEMRLIPKPSCLNTLPIQIPKFLWFILTNIVPFTRFIIETTKESYQRRQDVEESSSEEEETQQNLPQLRRRKKPGFVPVERDENELPQRLVHLSPASEDASISSVPISGGLWTDDDLGELCHLVKKYPGGTIDRWDKIADTMNRTVAEVTYMANKLKDNNYKLPGQDEPTPEVEPPKKQKTRGGKLPNESPDASKSSPAANWSQIQQKSLEAALAKYPKGPTDRWEKITKCVPDKTKEECMLRYKYLVELVKKQKEKKENDIEDGDTLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01225602;
- 90% Identity
- -
- 80% Identity
- -