Pcup008325.1
Basic Information
- Insect
- Poecilus cupreus
- Gene Symbol
- Dnajc1
- Assembly
- GCA_963942605.1
- Location
- OZ012713.1:42126632-42128154[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-06 0.0027 19.3 0.0 2 38 291 330 290 338 0.87 2 2 2.4e-10 6.2e-07 31.0 0.1 3 44 384 429 383 431 0.91
Sequence Information
- Coding Sequence
- atgtgtaattatttaaaatgtattcatttaattacgacaattttattaattgtcacATCAGTAAACGCTTGGGATTCAGATCAGTTAGAAATTTTCGATCTAGTCGAAGAAATAAACCAAAATTTCTACTcagttttaaatataactcaggatGCTGAtgcaaaagatataaaaaaagcaTTTCGAGCACTTTCTTTAGTTCTCCATCCAGATAAAAACGATGCTCCCGACGCTGAAGTACGTTTTCGACAAATGGTAGCAGTTTATGACGTTCTCAAAGATCCAAATAAACGTTCGCACTACAACGATGTCCTTAAAAATGGTTTGCCAAACTGGCGTTCAGCTGTTTATTACTATAGACACGTCAGAAAAATGGGATTGGCTGAAACGttatttactttgtttattgttattagtATTGGCCAATATCTAGTTGCTTGGGGTTcgtatattgaaaaaaaatatgcCGCGGAACAAATGTACGAAGCGAAGCTGAAAAAAGCCACGCGGAAACGGGGTTTGAACCCACAGCTTCAAGAATTGGAAGAAATTCTTTTAATTCCTAAGCCTTCTTTCTTGAATACTCTTCCTATACAAATACCTAAATTTCTTTGGTTTCTAACGACAAATTTCGTTCCTTTCACCTGTGCGGTCATCCAGAGTGCCAGGGAATCGTACCAGCGACGACAAGAAGTCGAGGAATCTTCCTCAGAGGAAGAAGAACCTCAACAATGTCAGCCGCAAGTCAGGCGAAGAAAAAAACCAGGTTTTGTACCAACTGAACGCGACGACAGTGAGCTGCCACCTAGGTTAATTCATATTGCCTCAACATCTGAAGAATCTAGCACATCTTCAGTGCCCATCAGCGGCGGATTGTGGACAGATGACGATCTAACAGAGCTCTGTCATTTAGTTAAGAAATATCCAGGTGGCACCACGGACAGATGGGAGAAAATTGCCGAGACAATGAATCGAACTGTGGCCGAAGTTACTTACATGGCCAATAAACTAaaagataataaatacaaaCTTCCGGGGCAAGAGGATCCCCCACCGGAGGTGGAACCTCCAAAAAAACAGAAAACCAGAGGCGGGAAGCTTTTGGGGCCCACCGAAACACAAGACGCTTCCAAGTCTTCCGTGGCGGCTAATTGGAGCCAGTTGCAGCAAAAAGCGCTGGAAGCGGCCCTGGCGAAGCACCCGAAGGGCCCAACGGACCGCTGGGAGAAAATCGCCAAGTGTGTACCCGAGAAAACGAAAGAGGAATGTATGCTGAGATATAAATACCTGGTCGAATTGGTGAAGAAGCAGAAAGTACAAGTTGTTGAGAATATTGAGTAA
- Protein Sequence
- MCNYLKCIHLITTILLIVTSVNAWDSDQLEIFDLVEEINQNFYSVLNITQDADAKDIKKAFRALSLVLHPDKNDAPDAEVRFRQMVAVYDVLKDPNKRSHYNDVLKNGLPNWRSAVYYYRHVRKMGLAETLFTLFIVISIGQYLVAWGSYIEKKYAAEQMYEAKLKKATRKRGLNPQLQELEEILLIPKPSFLNTLPIQIPKFLWFLTTNFVPFTCAVIQSARESYQRRQEVEESSSEEEEPQQCQPQVRRRKKPGFVPTERDDSELPPRLIHIASTSEESSTSSVPISGGLWTDDDLTELCHLVKKYPGGTTDRWEKIAETMNRTVAEVTYMANKLKDNKYKLPGQEDPPPEVEPPKKQKTRGGKLLGPTETQDASKSSVAANWSQLQQKALEAALAKHPKGPTDRWEKIAKCVPEKTKEECMLRYKYLVELVKKQKVQVVENIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01275209;
- 90% Identity
- -
- 80% Identity
- -