Ppup000802.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- bab2
- Assembly
- GCA_012977825.2
- Location
- Scaffold:3402564-3424459[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-12 1.2e-09 37.7 0.0 1 40 411 451 411 454 0.90 2 4 1e-11 1.1e-08 34.6 0.0 2 39 466 503 465 506 0.94 3 4 1.3e-18 1.3e-15 56.8 0.0 2 45 521 565 520 565 0.97 4 4 4.7e-18 4.8e-15 55.0 0.0 1 42 572 614 572 615 0.97
Sequence Information
- Coding Sequence
- ATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACGTCGGTGTTCCATCAGCTCCTGCAGACTGAGGCTTTCGTCGACGTCACGCTTGCCTGCAACGAAGCTTCGCTCAAGGCGCACAAGGTGGTGCTATCCGCGTGCAGCTCGTATTTTCAAAAGCTACTGTTGTCGAACCCCTGCAAGCATCCGACCATCATCATGCCCCAGGACGTCTGCTTCAACGACCTCAAATTCATTATCGAGTTCGTCTATAGGGGTGAAATCGACGTCTCTCAAGCAGAGCTTCAGTCTCTGCTGAAGACGGCCGACCAGCTGAAGATCAAGGGTCTCTGCGAAGTGCCGGAGAGCAGGGAAGGACCTTCGGTGAGCTTAAGCTCACCGCCACGTGACTCCAGTACACCCCGGTTGAACTTCGCCAAGCTCAAAAGGCACCATCCGCGCTACAAGAGGCCGCGAACCAACTTCGAGTCCGGCTCCAACGCTGCTCAGTCAAGAGCCAACACGGAGTCCTCGAAACACCACCATCACCTACATCGTCATCACGACAGCACCAAGTACAAGGACGAGGACTTTGTCGACAGCTACGTGCGCGACTGCAATAAAGAGAATCGGCGAGACTGGCCAGCTGAAGATGACGATTGCATGGAGACGACAGCGACGAGCACAACAGCAGTAGTCCTGGACTCGTGCCAGCGAAGCAGTGGCAGCGCAGGAGGAGCTGGAGGAGACAACAACAACAGCAGCGCCAGCGCTAACAACAACGCCGCCGCCGGAACCGCAGCCACCAACAACAACGGTGACATGTTCTGTCACACAGGTCTTGGTCACTACGGCCATCATCCAGACCCAGGCGAAGTAGACTTGCCACCTGAGACGCAGCCGACACCACCTAGCGCGACGCTCGTTGGTACTACCATCACTCACCTCAGGGATCCAGATCATCATACGGCAGACATTCAGAGCTGCGACAGTGTGAAGATAAAGTTCGAGACACTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACAGAGCGAGCGTCAGTTCGAAAAACGCGGATGACAACATGATGATGATCACACCAGAATTGCTGGGACTCATGCCTTCGGGCAGTTCGGTACACTCCGACTCCGGTGAGAACAACTCGCGCAGTCACTCAGGACAATCAGGCTCGCATCACCACGGCTCAAAGTCTTGGACGCAGGAGGACATGGATGCGGCTCTAGAGGCGCTCAGGAACCACGACATGAGCCTCACGAAAGCTTCCGCGACGTTCGGTATACCTTCCACAACGCTCTGGCAACGAGCCCACCGACTCGGCATCGAAACGCCGAAGAAGGACGGGCCCACTAAGTCCTGGAGCGACGAGAGTCTGAACAACGCCCTGGATGCGCTGCGTACCGGCACGATCTCCGCCAACAAGGCTTCCAAAGCTTTCGGAATACCCTCGAGCACGCTCTACAAGATCGCGAGGCGAGAGGGCATCAGACTGGCGGCACCGTTCAACGCCAGCCCAACGACCTGGTCGCCAGCTGATCTCGATCGAGCCCTTGAGGCTATTCGCTCCGGACAGACGAGTGTACAAAGAGCTTCCACGGAGTACGGCATTCCGAGCGGTACACTCTACGGTAGATGCAAGAGGGAGGGCATCGAGCTCAGCAGGAGCAATCCCACGCCCTGGAGCGAAGACGCGATGACCGAGGCTCTCGAGTCCGTCAGGTTGGGACACATGAGCATAAATCAAGCGGCGATCCACTACAATCTTCCCTACTCGTCGTTGTACGGCCGCTTCAAGCGAGGAAAGTACGAGGAGCCGGTGGTGAACGAGATGTCACAGGATGGCTCCTCTCAGCACTTCGTCCACCAGAGCCCGACCCAGAACCACTCGTCCTCGCTTCCCGACCAAATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNFAKLKRHHPRYKRPRTNFESGSNAAQSRANTESSKHHHHLHRHHDSTKYKDEDFVDSYVRDCNKENRRDWPAEDDDCMETTATSTTAVVLDSCQRSSGSAGGAGGDNNNSSASANNNAAAGTAATNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIETPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEYGIPSGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFVHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00463914;
- 80% Identity
- iTF_01274621;