Plou003391.1
Basic Information
- Insect
- Psyttalia lounsburyi
- Gene Symbol
- pnr
- Assembly
- GCA_030522865.1
- Location
- JAPYZN010000515.1:1-6716[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.49 2.6e+03 -0.9 0.2 2 13 182 198 182 205 0.75 2 2 2.2e-16 1.1e-12 48.2 5.0 1 34 367 399 367 401 0.98
Sequence Information
- Coding Sequence
- GTGAACGATGGCGACTCCCTGCCACCCATCATCTGTCACCGTTGTGTCTACAAATTGGATGTACTGCACAATTTTCGGGAAGTATCGCGTAAATCCGATGTCATACTCAAACAGTACCTGGACTATGCCAAGCAGTTGTCATCACCAGACAACCAGGACAAGTCTTTCTCCACTGCCAAAATAGCTGACCTGAGTCCACTCCAATCATTTCTACAATTAAACAAAACCCTCTTCAATGAGCCAAATTCACCCGCAAGCATCAATCAAAATGTATTACCTCAAACGCAGACCCATCATCTTGAGTTGAGGGCCAACGATATGCCTGAATCTGATAATCTTCAGTGCCAGCCTGAGGACGACACGTGCTCCAACAGCTCGGATCCAGACAGATTGGAAATTGAGGATCGCGAGGACAATGACGATGATGCCGATGAGAATGGCTATGACATGACTGTCAAACGCAAGAAAGTCGAGGATAATTGTGATGATTGCAAGAGAGAGTCACCCAATCGTAGTCCAGTCAATCGAATGGACACACCTGAGAGCAACTGCTCTGATACTAACATCGATCAGGAGACCACCAAGTTGTGGCAGGCACTTGCTAAcAATCGGAGTTTAGAGATAACGAGGACTAATGgggataaatttaataatggaTTCACTGGTGAAGCAACAAATCTTCTTCGATCACTCATTAATAACAGGCAAATTGGTATAACAGCTGTTGACACTGGGAGAACTTCACCCCAGATTAAGTTCTACAGAGACACACAGGGCACTACGATGGAACGCAATGATTGTCCTATTTTGGGAAATCGAACGAATATGCAATCGCACGAGAGCAAGAGCGCATCAATGGACAGTAATCCCTCCAGTCCAGCCAGTATTGGTAGAAAGGAGACGAAAGGGAGGAGAAAACAGAGTTACCCGAGTAAAGCACCAACGAGTCCAGACACGATGAATTATCAGCAGGATATGAGTGATGAGCAGGCTCAAAATTTCACATCGTGGTCGAATAAATTGCAGATCAAGGTCGAAGACCAGAAGCCGCAGTTTGATCAGCAGAGTGGCAACATGACAAAGAAAGTGGACATGTCCTGTACAAATTGTGGAACTATGACGACGACTATTTGGCGGCGCAACATGAAGGGGGAGATGGTTTGCAATGCGTGCGGGCTTTACTACAAATTGCACGGTATCAATAGGCCCCATACCATGAGGAGGGACACCATTCACACACGCAGACGTCGACCGAAGGGGGAAAAACCCATCAGACATCGAAAAAAAGAAGCAGCTATTGCTCCAGCCCAGGCCGACCAGATGGATGCAGAGAGTGCAGACATGCTGGCGGCCCTTCGTCGCCAAATTCAGCCGCATCTGATGATGGCAGCTCTGACACCGTCCCACATGTCCTCAGGACATCCACCAACAAGCCAATTAAATTATCCCCTTCCCCTCTCTACGTACATGATGCACCACGTTAAGGCAGAGCCCAGAGAACGCCATGACTCCGAGGATATGGAGGATTGTGACGACGAGAATGTCTCCGATGTACCACTTAATCTAGTGTCAACGTCATTATCGGAGGAGGCCCACTGA
- Protein Sequence
- VNDGDSLPPIICHRCVYKLDVLHNFREVSRKSDVILKQYLDYAKQLSSPDNQDKSFSTAKIADLSPLQSFLQLNKTLFNEPNSPASINQNVLPQTQTHHLELRANDMPESDNLQCQPEDDTCSNSSDPDRLEIEDREDNDDDADENGYDMTVKRKKVEDNCDDCKRESPNRSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKFNNGFTGEATNLLRSLINNRQIGITAVDTGRTSPQIKFYRDTQGTTMERNDCPILGNRTNMQSHESKSASMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDTMNYQQDMSDEQAQNFTSWSNKLQIKVEDQKPQFDQQSGNMTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGINRPHTMRRDTIHTRRRRPKGEKPIRHRKKEAAIAPAQADQMDAESADMLAALRRQIQPHLMMAALTPSHMSSGHPPTSQLNYPLPLSTYMMHHVKAEPRERHDSEDMEDCDDENVSDVPLNLVSTSLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00378398;
- 90% Identity
- iTF_00439138;
- 80% Identity
- -