Basic Information

Gene Symbol
pnr
Assembly
GCA_034640455.1
Location
CM067947.1:7300189-7307768[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.4 7.9e+03 -3.4 0.1 15 26 50 61 48 62 0.76
2 3 0.63 1.4e+03 -1.0 0.2 2 13 229 245 229 252 0.75
3 3 3.3e-17 7.5e-14 51.1 5.4 1 35 416 449 416 450 0.98

Sequence Information

Coding Sequence
ATGTTCAATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAATTGTCGATATTCGAGGAGGAAGGGGCACAGCGTAATTTTGCCGACAAGATTCTCACTTGTCTATCGATAACGGTGAACGATGGCGACTCAATGCCACCTATTATCTGTCACCGTTGTGTGTACAAACTGGATATACTGCACAATTTTCGGGAAATGTCACGTAAATCCGATGTCATACTCAAACAGTACCTGGACTATGCCAAGCAGTTGTCATCACCAGACAACCAgGACAAGTCTTTCTCCACTGCCAAAATAGCTGATCTGAGCCCACTACAATCATTTTTACAACTCAACAAAATCCTCTTCAATGAGGAGCCAAATTCACCCGCAAGTATCAATCAAAATGTATTACCTCAAACACAGACCCATCATCTCGAATTAAGGGCCAACGATGTGCCTGAATCTGATAGTCTTAAGTGTGAGCCCGAGGATGACACATACTCCAACAGTTCCGATCCAGATAGATTGGAAATTGAGGATCGCGAGGACAACGACGATGATGCCGATGAGAATGGGTATGACATGACTGTCAAACGTAGGAAAGTCGACGATAATTATGATGATTGTCAGAGAGAGTCACCCAATCGCAGTCCAGTTAATAGAATGGACACACCTGAGAGCAATTGCTCCGATACTAACATCGATCAGGAGACTACCAAGTTGTGGCAGGCACTTGCGAACAATCGAAATTTAGAGATAACAAGGACTAATGGTGACAAATTAAACAATGGATTTTCCGGTGAAGCTACCAATCTCCTTCGATCACTCATTAACAACAGACAAATTGGTATAACAGCGGTTGACACTGGCAGAATTTCACCTCAGATTAAGTTTTACAGAGATACACAGGGGACGGCGATGGAACGGACCGATTGTTCCATTTTGGGGAATCGAACGAATATGCAATCGATCGAGAAGCTCGAGAAGAGTGCATCGATGGATAGTAATCCATCCAGTCCAGCCAGTATTGGGAGAAAAGAAACAAAAGGCAGAAGAAAACAGAGTTACCCAAGTAAAGCACCAACGAGTCCAGACACGATAAATTATCAGCAGGATATTAGTGAGGAGCAGGCTCAAAATTTCACATCCTGGTCGAATAAGTTGAAAAGCAAGGCTGAAGAACAGAAACATCAGTTCGACCAGCAGAGTGGCAACATGACAAAGAAAGTTGACATGTCCTGTACAAATTGTGGAACAATGACGACAACTATTTGGCGGCGTAATATGAATGGAGAGATGGTCTGTAATGCGTGTGGCCTTTACTACAAATTGCATGGTGTCAATAGACCCCATACCATGAGGAGGGACACCATCCACACTCGCAGACGTCGGCCGAAAGGTGAAAAACCGACGAGACATCGAaAAAAAGAGGCAGCTATAGCGCCAGCCCAAGCTGATCAGATGGATGCAGAAAGTGCAGACATGCTGGCAGCTCTACGTCGTCAGATTCAACCCCACCTGATGATGGCAGCTCTCACCCCATCGCACATGTCCTCAGGACATCCACCGACAAGCCAACTCAATTATCCCCTTCCCCTCTCCACATACATGATGCACCACGTTAAACCAGAGCCAAGAGAACGCCATGATTCTGAGGATATGGAGGATTGTGACGACGAGAATGTCTCTGATGTACCACTTAATCTAGTGTCAACGTCATTATCGGAAGAGGCCCACTGA
Protein Sequence
MFNVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLSITVNDGDSMPPIICHRCVYKLDILHNFREMSRKSDVILKQYLDYAKQLSSPDNQDKSFSTAKIADLSPLQSFLQLNKILFNEEPNSPASINQNVLPQTQTHHLELRANDVPESDSLKCEPEDDTYSNSSDPDRLEIEDREDNDDDADENGYDMTVKRRKVDDNYDDCQRESPNRSPVNRMDTPESNCSDTNIDQETTKLWQALANNRNLEITRTNGDKLNNGFSGEATNLLRSLINNRQIGITAVDTGRISPQIKFYRDTQGTAMERTDCSILGNRTNMQSIEKLEKSASMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDTINYQQDISEEQAQNFTSWSNKLKSKAEEQKHQFDQQSGNMTKKVDMSCTNCGTMTTTIWRRNMNGEMVCNACGLYYKLHGVNRPHTMRRDTIHTRRRRPKGEKPTRHRKKEAAIAPAQADQMDAESADMLAALRRQIQPHLMMAALTPSHMSSGHPPTSQLNYPLPLSTYMMHHVKPEPRERHDSEDMEDCDDENVSDVPLNLVSTSLSEEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00378398;
80% Identity
-