Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: Hivep2_1
Assembly: GCA_030522865.1
Location: JAPYZN010001971.1:3392-5233[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 9.5e-06 0.0016 19.8 2.6 2 23 242 263 241 263 0.97

2 13 0.00017 0.028 15.8 4.0 1 23 269 291 269 291 0.94

3 13 0.0003 0.05 15.1 0.8 2 23 297 319 296 319 0.93

4 13 4.6e-07 7.7e-05 23.9 1.8 1 23 331 353 331 353 0.99

5 13 9.3e-07 0.00016 22.9 2.0 1 23 359 381 359 381 0.97

6 13 9.4e-06 0.0016 19.8 1.4 1 23 387 409 387 409 0.97

7 13 0.0025 0.41 12.2 0.4 1 23 415 437 415 437 0.99

8 13 3.6e-05 0.0059 18.0 0.2 3 23 445 466 443 466 0.94

9 13 1.2e-05 0.002 19.5 1.3 1 23 472 494 472 494 0.98

10 13 7.6e-05 0.013 16.9 4.7 1 23 500 522 500 522 0.98

11 13 3.9e-06 0.00065 21.0 0.2 1 23 528 551 528 551 0.96

12 13 4.8e-05 0.008 17.5 3.9 1 23 557 579 557 579 0.97

13 13 5.6e-06 0.00094 20.5 4.6 1 23 585 607 585 607 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	9.5e-06	0.0016	19.8	2.6	2	23	242	263	241	263	0.97
2	13	0.00017	0.028	15.8	4.0	1	23	269	291	269	291	0.94
3	13	0.0003	0.05	15.1	0.8	2	23	297	319	296	319	0.93
4	13	4.6e-07	7.7e-05	23.9	1.8	1	23	331	353	331	353	0.99
5	13	9.3e-07	0.00016	22.9	2.0	1	23	359	381	359	381	0.97
6	13	9.4e-06	0.0016	19.8	1.4	1	23	387	409	387	409	0.97
7	13	0.0025	0.41	12.2	0.4	1	23	415	437	415	437	0.99
8	13	3.6e-05	0.0059	18.0	0.2	3	23	445	466	443	466	0.94
9	13	1.2e-05	0.002	19.5	1.3	1	23	472	494	472	494	0.98
10	13	7.6e-05	0.013	16.9	4.7	1	23	500	522	500	522	0.98
11	13	3.9e-06	0.00065	21.0	0.2	1	23	528	551	528	551	0.96
12	13	4.8e-05	0.008	17.5	3.9	1	23	557	579	557	579	0.97
13	13	5.6e-06	0.00094	20.5	4.6	1	23	585	607	585	607	0.98

Sequence Information

Coding Sequence: ATGAACGATATTCATTCAGAAAGAATAAAGAACGATGAAAATTCGAGGGAAGAGTCCACTGGTCTCCAAGAGCACCCACCTCAACGAAGTCCCCAAATAAATGAGAAGGCTGAGCTCCACATGATCGACCTGCGAAATGACCTGGACAATAATGAAAACACTCCACACAAACACTGCTTAGTATACATCGAGACATACTCCGGGTATATTGTGCTAAAACCCCTACGACTGAAGACTGAAGAGGAAATAGCCAAGAACCTCATAGACATCTTCTCCATGACAGGATCTCCAGCGGTAATTACCTATCACACTAGTAAAAATCATTCAGCAAAATTATCAGCAGCCCTAGAAACCTACAAAACATCGATCGTCAGTCCCCAAGTGGAGCAAAACGACAATAGAGAGAGCACAAGCTCgctgaaaaatgatttaaacGATGAGTTGTTCGACTGGGCCAGAGAAAATCCAGACAAGCCCCTAGAAGTCGGGCTAAAGTGTCTCCAGATAACCAAAAACAACCGGATAAATCCACTAACGAAGAAGTCCCCAATGCAATTACTGTTCAGCCAATTGATAACCTTAAACGACCAAACTCTCTGCCAATCAAGAACATCTCCGACAGCTACCGAAGTCAAAGAACCCCCAAAATCGTTGAAATCCCCCAAAAAACGTCTGAATCCCAGACAATCGTCCAAGCCATTGGTACCCACTCCCTCCCCGCTCACCTGTCCCCACTGCTCCCAGAGGTTCACCTTCCCAAGCGTACTGAAACGTCACCTGCGATCTCACACGAACGAGCGTCCCTACGCCTGCGAGATCTGCAATAAAACATTCAAGCAACTGGGCCACCTGAGCCAGCACTGCCTCACCCACGACTTCCCGACGTCCCAGTGCACAATCTGCAGTACAAAATTCGAGTCCCTAGACCAACTGAAGACCCACTTGTCGGAGAGCCACAGAAATAAACGGGGATTGACAATCAGGCCGTCATTTCAATGTGACAACTGCAAGAAAAACTTCACGACGAAGAGTGTCCTGGAGCGCCACATCCTGACGCACACCCACGAGCGTCAGTTCGACTGCAAAGtctgtggaaaaaaattcaagcagGCGGGACACCTGAAGTCCCACACGTTGGTTCATACTGGGGAGAGGAAGTTCGCGTGCTCGATATGCTCCAAGCGCTTCAGCCTCTCAAACAGCCTGAAGAAACACATGTACGTTCACAACGGCGAGAAGCCGTACCAGTGCGACGTGTGTGGATCCAGATTCCTGGAGCGACGAAACTTGAACGGCCACCTGATGACCCACACCAATGAGCGGCCCTTCGGCTGCAAAATATGTGGCAAGCGCTACACATTGGCAGACACCCTGAGACGTCACATCAGTGCAGCCCACGAGAACGGGAGGACTTATCAGTGCGAGATCTGCGCGAAGATGTTCAAGCAATTGGCGCATCTGTCAGTGCACAAGAAAGTTCATACCGACGAGCGTCCATTCCAGTGTCACCtctgcgataaaaatttcaagcacAAAAATGTGCTGAAGAGCCACCTGGCGATTCACGCCAACGTCAGGCCATTCGAGTGCGACGTCTGCAAGGCTACCTTCGTCAGGAAGACCAACTTGCAGACCCACATCGCCTCTGCGCACATGGACGAGCGGCCATATTGTTGTAAAATATGTAACAAGAGGTTTAAGCAGATCAGTCACCTGAACGGGCACGTCATTGTGCACAGCAACTCCATGCCATTTCAGTGTGATTACTGCGAGAGGAGGTGTAACAGGCTAGACAATCTGAAGAAGCACATGAAGCTCCATGAGAAGAATAAAGGCATATGA
Protein Sequence: MNDIHSERIKNDENSREESTGLQEHPPQRSPQINEKAELHMIDLRNDLDNNENTPHKHCLVYIETYSGYIVLKPLRLKTEEEIAKNLIDIFSMTGSPAVITYHTSKNHSAKLSAALETYKTSIVSPQVEQNDNRESTSSLKNDLNDELFDWARENPDKPLEVGLKCLQITKNNRINPLTKKSPMQLLFSQLITLNDQTLCQSRTSPTATEVKEPPKSLKSPKKRLNPRQSSKPLVPTPSPLTCPHCSQRFTFPSVLKRHLRSHTNERPYACEICNKTFKQLGHLSQHCLTHDFPTSQCTICSTKFESLDQLKTHLSESHRNKRGLTIRPSFQCDNCKKNFTTKSVLERHILTHTHERQFDCKVCGKKFKQAGHLKSHTLVHTGERKFACSICSKRFSLSNSLKKHMYVHNGEKPYQCDVCGSRFLERRNLNGHLMTHTNERPFGCKICGKRYTLADTLRRHISAAHENGRTYQCEICAKMFKQLAHLSVHKKVHTDERPFQCHLCDKNFKHKNVLKSHLAIHANVRPFECDVCKATFVRKTNLQTHIASAHMDERPYCCKICNKRFKQISHLNGHVIVHSNSMPFQCDYCERRCNRLDNLKKHMKLHEKNKGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00438918;
90% Identity: iTF_01273255;
80% Identity: -