Pcon015542.1
Basic Information
- Insect
- Psyttalia concolor
- Gene Symbol
- -
- Assembly
- GCA_030522845.1
- Location
- JAPYZM010008689.1:7923-9936[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0016 30 5.8 0.0 60 102 53 95 12 112 0.80 2 2 1e-06 0.019 16.1 0.0 31 66 128 163 121 170 0.87
Sequence Information
- Coding Sequence
- ATGGTGGAGGAGAACCTGTTGATATTAATGGACATCGttGCAGATGACTCGATGCCAACATTCGCTGAGCAAATTCAGAATGTCACAGTCAGCGTTGGACGCGACGCGCTTTTGGCTTGTGTCGTCGATAATCTTAAACGATATCAGGTAGCGTGGGTTCGAGTGGATACACAAACAATACTCTCGATTCACGACAATGTGATAACACAGAATCCGAGAATCTCGTTGTCATACAATGATCACAGATCCTGGTATCTTCACATAAAACGAGTGCAGGAAGTTGATAGGGGATGGTACATGTGTCAGGTGAATACTGATCCGATGAGGAGTATGCAGGGATTTCTGCAAGTTGTTGTACCACCAAAGATCATAGCAAAGGAGACCTCGACAGACATGGTAGTCCGTGAAGGTTCCAACGTAACTCTGGTGTGCAAAGCCACCGGATATCCAGAGCCGTACGTAATATGGCGTCGTGAGGATGGAATGAGTATAAACTACAATGGAGAGAGTGGTGAGTACAAAATGTGA
- Protein Sequence
- MVEENLLILMDIVADDSMPTFAEQIQNVTVSVGRDALLACVVDNLKRYQVAWVRVDTQTILSIHDNVITQNPRISLSYNDHRSWYLHIKRVQEVDRGWYMCQVNTDPMRSMQGFLQVVVPPKIIAKETSTDMVVREGSNVTLVCKATGYPEPYVIWRREDGMSINYNGESGEYKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -