Pgib007349.2
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- RHOBTB1
- Assembly
- GCA_963971405.1
- Location
- OZ020486.1:8493940-8526098[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-08 3.4e-06 27.7 0.0 7 45 262 299 257 316 0.85 2 4 0.0049 1.1 10.0 0.0 57 90 435 466 417 480 0.77 3 4 3 6.6e+02 1.0 0.1 79 104 541 566 534 571 0.82 4 4 2.1e-16 4.5e-14 53.0 0.0 6 104 596 693 592 698 0.93
Sequence Information
- Coding Sequence
- ATGATAATGGACAATGAGCAACCTCACCAGGAGCTGGTCAAATGTGTGGTCGTCGGAGACACTGCCGTCGGCAAGACGAGACTCATCTGCGCACGCGCGTGTAACAAACATGTCTCCCTGTCGGAGCTCCTCACCACCCATGTGCCCACTGTCTGGGCCATCGACCAGTACCGCATCTACAAGGATGTGTTGGAACGAAGCTGGGAGATGGTGGACGGTGTTAACGTTTCCCTACGCCTCTGGGACACATTCGGCGACCACGAGAAAGACAGGAGGTTCGCCTATGGACGGTCGGATGTGGTTCTCCTCTGTTTCTCGGTCACCAACCCGATGTCGCTCAAAAACTGCCTGGCTATGTGGTATCCGGAGATCCGGCGTTTTTGCCCGCAGACGCCGATCCTTCTGGTTGGGTGCAAGAACGACCTGAGACACCTGTACCGGGACCAGCTTTACCTCAGCTTCCTCAAGGACCGCAGTCCTTTCATAAGAGCTACGCGGAAAAGTGATTTAGTAATGCCTGACCAGGCGCGGGCGGTCGCCCGGGAGCTCGGCGTCAATTACTACGAGTCATCCGTCCTCACCGATTTCGGAGTCAACGAGGTCTTCGAGAACGCTATTAGGGCGGCGCTAATTGCACGCCGACAGCAGCGGTTCTGGATGACCAATCTGAAGAAAGTACAACGACCTCTCGTGCAGGTGCCATACTTGCCGCCAAAACCGACACCACCGGAAGTGTACGTGTCTGAGAGTAGCTACGACGATAATTGGCTGTCCATGTGGCTTTCACCCAAATATACGGACGTTCTTCTTATAGCAGACGATGTTTTCATTACCGCACACAGGTTTGTTTTAGCGTCTGCCTCGCCATGCTTCCTCCAGCTTTTCACCACGGAGACCATGGAGCTGGGGGCTAGGAGTTCCAGCGACTCGAGTGTTGCGTCGACCCTGGGAGAAGCAACCCTTGGTGAATTTAATGATGAAACTGAATGCCTCATCCGATCTGATAAGAAATCCTTCCGGCTGTGGGAGCAGTCCAAACGCAGATCCAGCAGCCAAGTCCATTGTAACTCGCGGAAACTAGGCACCTTCAAGGAGGTGAAGCACTCGGCGTTCGATTCCACCAGCCGCAACTGGCTGTGGGACCAGTCCAAACGCAGATCTAGCTGCCAAGTCCTCGGTAACTCGCGGAAACTAGGCACATTCAAGGAGGTGAAGCACCCGGCGTTCGAGTCCATCTGCGTTAAATGGTACCCCGACGACCTGTCCCGGTCCTCGACTCTGCAGACGGTTCTGCGTGTCAGTAGTCTGATTACACCCCAGGCACTCAACCAATGTCTCCAGTTTATTTACACGGGCACCATTTCATTCTCAACTGCCACTGACCTACTGgttttggttatctacttttatcgatccaggttcctggcttatgcattccatgtactctgttttcttgcgattcactttaagcccctggcgctccaccgtttccacccacagtctgagagtactctcgacatcttctcgctagtctcctaccaggaggatatcatcaacgaagagaaggctttctggcgcttgcccttgcatctgcctggtcactacgtccattatgagaacgaacaacagcggttcaagGATATCCGGCAAGCAGCAGACTTCTTGGAACTGCGTGATCTCGTCAAGCTTGTGACTCATATCCAGTTAAGGGAAGAATTTCTCCATAATGATCTCAGAATCACATTTCTACGGAGTGTACGGGACAGAATGAAGGAATTGTGTGTGGAGCAGGGCCTGTTCTCAGACATCATGTTCCAGCTGGATGACGGGTGTTATACGGCCCACAGACAACTGCTTATAGCTCGCTGTGACGTCATGAAGGCCATGTTTACAGGGGCCTTCCGCGAAAGTGCTGCCAAAGTGATAATATTCCCGGGAGTCGGCGAGGATACCTTCCAGAGCTTGTTAACGTACTTGTACACTGACGACATCCCCGCCATCTCGCCCGACCGCTGTGTTTCCCTGCTGGAGCTCGCCAACCGCCTATGCTTACCCCGGCTCGTTAACCTGATCGAGTCCCGGGTTGTCAGCGTACTTTCCACGTATTCTGCCGAGGAGGTCATCGAGCACTGTCTCCGAATACTTGAACCCAGTCAGTTGCACAATGCACACCAACTAAAAGACTGGTGCCTGAACCATCTTTGCACCAACTACAACGTGCTATGCAAACACAGCGCCAAGTTGCTGCGTGGCCTACTGCCAGAGAACCAGGATTACCTCAGGGAACATCGCTGGCCCCCCGTCTGgtaTCTCAAGGAGTACGACAACTACGAGAAATGTTTAAGtgagagagagaaagaagacAAATCTTCGAGAGGACGTGCCGGGACAGGTTGTCTCTGCTTTCCAACGGCAAGGTCTACAAAACAAGCTAATGCTCATAAAGTTTTATGGAACAGTTCAAACAATAATGCCAGGGGAATAGCTTTACTGAACTTCTTTATCGCGCATGATCTTCATGTGTGTAATCGTGGTAGCCGTCCGACATTTTCCAATGCTGTTAGAGATGAGGTTCTGGATTTAACTTTCTGTAGCGTGGGGATGGTCTCCTTGATACCAGATTGGAAAGTCTCCACGGAGGAATCCTTAGCTGACCACAGTCATATATACACCATAAACAAAGGACCACGGTCTCAGGCTAAGTTTATTAGAAACCCCCGCAAGACAAAGTGGCTGAAGTATATGGAGGAGTTGAAGCCACGGGCTGAGAACATACCGAGTGGAGAACCTCGTGATATAAAAGAACTAGATGATAAGGTGTAA
- Protein Sequence
- MIMDNEQPHQELVKCVVVGDTAVGKTRLICARACNKHVSLSELLTTHVPTVWAIDQYRIYKDVLERSWEMVDGVNVSLRLWDTFGDHEKDRRFAYGRSDVVLLCFSVTNPMSLKNCLAMWYPEIRRFCPQTPILLVGCKNDLRHLYRDQLYLSFLKDRSPFIRATRKSDLVMPDQARAVARELGVNYYESSVLTDFGVNEVFENAIRAALIARRQQRFWMTNLKKVQRPLVQVPYLPPKPTPPEVYVSESSYDDNWLSMWLSPKYTDVLLIADDVFITAHRFVLASASPCFLQLFTTETMELGARSSSDSSVASTLGEATLGEFNDETECLIRSDKKSFRLWEQSKRRSSSQVHCNSRKLGTFKEVKHSAFDSTSRNWLWDQSKRRSSCQVLGNSRKLGTFKEVKHPAFESICVKWYPDDLSRSSTLQTVLRVSSLITPQALNQCLQFIYTGTISFSTATDLLVLVIYFYRSRFLAYAFHVLCFLAIHFKPLALHRFHPQSESTLDIFSLVSYQEDIINEEKAFWRLPLHLPGHYVHYENEQQRFKDIRQAADFLELRDLVKLVTHIQLREEFLHNDLRITFLRSVRDRMKELCVEQGLFSDIMFQLDDGCYTAHRQLLIARCDVMKAMFTGAFRESAAKVIIFPGVGEDTFQSLLTYLYTDDIPAISPDRCVSLLELANRLCLPRLVNLIESRVVSVLSTYSAEEVIEHCLRILEPSQLHNAHQLKDWCLNHLCTNYNVLCKHSAKLLRGLLPENQDYLREHRWPPVWYLKEYDNYEKCLSEREKEDKSSRGRAGTGCLCFPTARSTKQANAHKVLWNSSNNNARGIALLNFFIAHDLHVCNRGSRPTFSNAVRDEVLDLTFCSVGMVSLIPDWKVSTEESLADHSHIYTINKGPRSQAKFIRNPRKTKWLKYMEELKPRAENIPSGEPRDIKELDDKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -