Basic Information

Insect: Psococerastis gibbosa
Gene Symbol: Hr39
Assembly: GCA_963971405.1
Location: OZ020484.1:22836023-22857813[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.052 6.6e+02 -0.1 2.1 134 170 315 354 235 450 0.58

2 3 1.9e-08 0.00025 21.1 0.0 1 26 545 570 545 582 0.91

3 3 1.9e-71 2.4e-67 228.6 0.0 150 408 588 849 575 849 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.052	6.6e+02	-0.1	2.1	134	170	315	354	235	450	0.58
2	3	1.9e-08	0.00025	21.1	0.0	1	26	545	570	545	582	0.91
3	3	1.9e-71	2.4e-67	228.6	0.0	150	408	588	849	575	849	0.90

Sequence Information

Coding Sequence: ATGGAAAGCAGTCGTACACAATTTTGGGATGAGGATGGCTCAGTTTATTACAACGTTGTGTGGCTTTTGGAAGTTACTGAGTTCTGTTCAGTGGACGAGCAACTTCTGCTAGTTCACTTTATGAAAGGAATAGTTGCAGAAGTTCCTGACAGTTTGTTAAATAGGGCATTGAATGAGCAAAGGGACACTGGATGCGGGCTGGAAGTAGCGTGGACGCCAGCGGTACCGGCAGCCATGGAAGGGCCTGCCAACGCCTGGTCTCCCCGGTATGCCTCCCAAGTGTCGCCAACTCGCGGAGTGGTCTCGGTGGTGGTGGACTCGCAAGTAGAGGGTGGCAACGTGCTGACGATCAAAGAGGAGCACGTGGTGGGCCGGGGGACGTCGGTGACGTGCGGAGGGGTCACTGTTACGTCTATTAACGTCCCACACGACGCGCAACGCCCTTCTCCTGAAGgAAAAAGTTGCAAATACTACGAAGGAGTTAATGGCGATTTAGCAGTCAAGTGCGAGAGTGGGGTGGGTGACAATGACTCTGGCTCAGATGCAGAAGTCAGCAAAATTGATTTTTCAAGTGTCCATATGCGTATGAAGAAGGCACGGGGGCCGGGAGACCGGCGGGCAGGCGACGGGTACCCTGCTGAGGAGCCGGTCAGGCCAATGTCGTGGGAGGGCGACCTCTCCGACACAGAGATGTCCCTGGTCAACGCTGGCAAGGAGGAGGAGAGGATGGAGGTCCAATCTTCCGGGAAAACCAACAATTATGATGATGGCATGGTTGGATCGATCATTCAACAGTCGAGGTTGAAGCATGATTCGAATCATCTGCCCAGTCAGGAGTTACCGGTTTTGGTTGACAAAATTCTTGGTGGCTACTGTACTCCATCAAACAGCCCCGTCATGCAGCGGCAGCACCCGACCCTAGCTAAGCAACACTCACACCTGTCCAACCTGCCGCCGAATCCGTCACCGGACTCGGCCATCCACTCGGCGTACTCGTACTCTTCACCGGCTGCGTCGCCTGCCACCTCGCGGCACCTACCCTCCTCAGGCTTCtcatccccctccccctttacaCCGTCCCTCTCCCGCAACAATTCAGATGCAAGCCAGTATGGGGGAAGTCAGCACAGTAGTTGCTATAGTTATACCAGTGAGACATTCAGCTCCAGCCCTACTCACTCACCTGTCCAATCGCGGCATTTGCTTGGATACTCGAGAGTCGATGGCAGCCCCCTCCATGTTATGCCTGGAGGGGTTGTGTACGGTTCCCGTAACATGTTAGATGTCTCCCAACTGGAAGGCGAGCGGGACCGCGAAGAAGACTGTCTGGAGGACAAGATGTCCTCGCTAGCTGCTGATTTGACGCAGCATTCTGCTCTTGCGGCGCCGCCTGGCATCTCACGCCAGCAGCTCATCAACAGCCCCTGTCCAATCTGCGGAGATAAGATATCTGGGTTCCACTATGGGATCTTTAGCTGTGAATCGTGCAAGGGATTCTTCAAGCGAACAGTTCAGAACAGGAAGAACTACGTTTGTTTACGAGGCTCCCAGTGTCCTGTGACCATTGCTACAAGAAAGAAGTGTCCAGCATGTCGCTTCGAGAAGTGCCTCAAAATGGGCATGAAGCTTGAAGCAATACGAGAGGACCGTACCCGGGGTGGTCGGAGCACATACCAATGCTCATACAGCGTGCCCGCCTCGCTGCTGCAGTCGGACGGCGTCCATCGCATGGGAAACCATTCTTCCGGAGAGTCCATGGTCAAAGTGGAGGTTCCTGACGCAAGCTCCAATTCCAGTGTCGACGCACGGCTTCTTCCTGTACCCCAGCTACTCCAGGAGATAATGGACGTGGAGCATCTGTGGCACTATAACGAGCGCGAGATGTTGGGCGGAGGTGGAGGCTCCCCCCAGTCGACTCCGTCCTCCCCCTCCAGCGGCCCCAACGAGCCCAACCCCGACTTTCTGTCCAACCTGTGCAATATCGCGGACCACCGTCTTTACAAAATTGTCAAGTGGTGCAAGAGTCTTCCTCTCTTTAAAAACATTTCAATTGATGATCAGATCTCGCTGCTTATCAATTCCTGGTGCGAGCTACTGCTGTTTTCCTGTTGTTTCCGCTCAATGGCGACGCCTGGCGAGATCCGCGTGTCTCTTGGCAAgtcaatttcgctgggaaaggCAAGGGAACTTGGCCTGGGCCCTTGCATTGAGCGGATGCTTAATTTCACGCAGCATTTACGTCGATTGCGacttgataaatatgaatacgTTGCTATGAAGGTAATTGTTCTGCTTACGAGTGATGTGAATGATCTGAAGGAGCCGGAGAAAGTGCGAGCATCGCAGGAGAAAGCGTTGCAAGCCCTGCAGCATTACACCCTGGCTCACTACCCGGATTCTCCGTCTAAGTTCGGTGAACTTCTGTTGAGGATACCCGAACTGCAACGTACGTGCCAGGTTGGAAAAGAAATGTTGTCTATAAAAAATCGAGAGGGCGAGGAAGGGCCCAGCTTTAATTTGCTGATGGAATTGTTGCGAGGTGACCACTGA
Protein Sequence: MESSRTQFWDEDGSVYYNVVWLLEVTEFCSVDEQLLLVHFMKGIVAEVPDSLLNRALNEQRDTGCGLEVAWTPAVPAAMEGPANAWSPRYASQVSPTRGVVSVVVDSQVEGGNVLTIKEEHVVGRGTSVTCGGVTVTSINVPHDAQRPSPEGKSCKYYEGVNGDLAVKCESGVGDNDSGSDAEVSKIDFSSVHMRMKKARGPGDRRAGDGYPAEEPVRPMSWEGDLSDTEMSLVNAGKEEERMEVQSSGKTNNYDDGMVGSIIQQSRLKHDSNHLPSQELPVLVDKILGGYCTPSNSPVMQRQHPTLAKQHSHLSNLPPNPSPDSAIHSAYSYSSPAASPATSRHLPSSGFSSPSPFTPSLSRNNSDASQYGGSQHSSCYSYTSETFSSSPTHSPVQSRHLLGYSRVDGSPLHVMPGGVVYGSRNMLDVSQLEGERDREEDCLEDKMSSLAADLTQHSALAAPPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSQCPVTIATRKKCPACRFEKCLKMGMKLEAIREDRTRGGRSTYQCSYSVPASLLQSDGVHRMGNHSSGESMVKVEVPDASSNSSVDARLLPVPQLLQEIMDVEHLWHYNEREMLGGGGGSPQSTPSSPSSGPNEPNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQISLLINSWCELLLFSCCFRSMATPGEIRVSLGKSISLGKARELGLGPCIERMLNFTQHLRRLRLDKYEYVAMKVIVLLTSDVNDLKEPEKVRASQEKALQALQHYTLAHYPDSPSKFGELLLRIPELQRTCQVGKEMLSIKNREGEEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01272211;
90% Identity: iTF_01272211;
80% Identity: iTF_01272211;