Ppal000112.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- -
- Assembly
- GCA_014825455.1
- Location
- QVNV01020629.1:55611-69236[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-05 0.37 10.2 13.0 50 191 8 156 6 204 0.50 2 2 2.1e-07 0.0045 16.6 0.1 347 384 203 240 183 253 0.80
Sequence Information
- Coding Sequence
- ATGGTGAATCCTGATCCGCTGATTCAGTCAAAATTAGGACATTTTACGCAAATACAGCATTTGCTCGACGAACCTGTACACAGTAGAGGTCTTATCGGCATCGAAGTCGTCCCGCAAAGTCCAGCGCCTTCGCCTTCGCAAAGTTCGACGTCACAGAGTCCTACATCTTATTCCACGTCGCACAGGTCGAGCTCTAGCTACTCCAAGACCAATTCCCCGTCCGCGGAGTTTAAGAAACCCGGTGGGCTCGGAGGGCCCAACAACTCCTTATCGTCAAGCTCGAGAAGTCATCAGGAACGGAGCAGCTTCGTTAAACCCGCGGACGGTAAGCTGTCGTACAGCAATCGAAGTGGCTATTCGAGTCAGATAGTTAAGTACAGCAGCAACAGCAGCAGCAATAATGATCATCGCAGCCATCTTTTACTTCCGGCCAAGTGCCTACCACAGCAGCACCCGCCTCTCTCCGTGAGAAACAACGGTATGTTACCAGCCGGAAGTTCCAACGGTATCAGCAACTCTAGCGGCAGCCTCGCGAGCCGCGTTCAATTCAGCGGCCGACTAAAGTTAAGCGAAATTAACGGATCGCGGTCATCAGTCGACAATATACCAGATGTGGAAAACATTCTGAAGGAAATGACTGTGCCGCTCGCACCAGTGTCAGCGATCGCGCAAACACCACGGAAGGACCAGGAATCGAAGTTCACCTTCAACACTCATCTGGCTAAGTTGACGGAAGTCAATCCGCCAGAGCCCGCAAAGCCTCAGTACGATTTGAATTTATAA
- Protein Sequence
- MVNPDPLIQSKLGHFTQIQHLLDEPVHSRGLIGIEVVPQSPAPSPSQSSTSQSPTSYSTSHRSSSSYSKTNSPSAEFKKPGGLGGPNNSLSSSSRSHQERSSFVKPADGKLSYSNRSGYSSQIVKYSSNSSSNNDHRSHLLLPAKCLPQQHPPLSVRNNGMLPAGSSNGISNSSGSLASRVQFSGRLKLSEINGSRSSVDNIPDVENILKEMTVPLAPVSAIAQTPRKDQESKFTFNTHLAKLTEVNPPEPAKPQYDLNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267555;
- 90% Identity
- iTF_01267555;
- 80% Identity
- -