Basic Information

Insect: Pseudomyrmex pallidus
Gene Symbol: lov
Assembly: GCA_014825455.1
Location: QVNV01024173.1:9655-12902[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.1e-15 1.4e-12 47.3 0.0 1 44 536 579 536 580 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.1e-15	1.4e-12	47.3	0.0	1	44	536	579	536	580	0.95

Sequence Information

Coding Sequence: ATGTCGAGCGTCGGGGACAGCCCCGACATAATGCAATCACACGATCACTACTCCCTACGTTGGAACAACCATCAAAATCACATACTGCAGAGCTTCGAGGAGCTGCTAGAAGAGGAAAGCTACGTCGATGTGACCTTGATCTGCGCCGAGACTAGCTTGAAGGCACACAAAGTCGTCCTCGGTGCTTGCAGTCCTTTTTTCCGGAGGATATTCGCGGAACATCCGTGCAAGCATCCCTTGATCGTGTTGAAGGACTTCACGCGCGCCGAGCTAAATGCGCTGATCATTTTTATGTATCGCGGCGAGGTGAAGGTCGCCCAGGAAGAGCTACCGGGATTGATGAAAGCTGCGGAGTGCCTGCAAGTACGCGGTTTGTCAACATCGGAACCTAGACCAGTGTCAGCGGAGCCTAGGCAGTCGCCGTTGTGCGCGATGCACGACCTTCTTTCCGAGCCGCTAACGCCGGAAGCCGCGCGACCGGCCACCCCCGAGGAGGATGAAAATGCGATGGAGACCTCGAGGGAAATACCGCCCATTCTGTTTCAACCAACGAGGGACCAGGCCAAGGTGCCGCTCATCAGCAACATGAGTTTCGGCATTCGCGATAGCTGCGGCTCGCCGTTGCCGCGTCGGAAACAGGCGCGACCGCGCCGTCGATCGGGAGAACTGCCCCAAGATCTAAGCAGACGATCAAGCCCGCTAACCAGCTCGAGCCCGTGTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATCTCTCGGTGAAAAAGCCCGTATCGCCAAGCGATTTGGATCAGCACCACGTGAAAACAGAAGGTAGCGAGGCAACGAGCAGTCCACGCGGCTCACCGCTCACGGGCACAAGTTTACTTCATTCCGACGGTCCTGTTCAGGATATTCCGAACGCAGCGGCAGTGGCAGCGGCAGTCGCGGTTACAATACCGACGATGTCGACGTTGTCATTGCCGCAGTCACATCCTCCTGAGTACCTGACAAATCTCGGACAGCTGGCTAGACAGTGGCTGCCCGGACATCCGCCGAGTCAACTACCACCCCCGCCGCTTCAAGCCCATCATCAGCGAGAGGAAAGTCCGCACGGGCCCGGAAATCCGAGCTCTCATCCGTATCAGCAGCAACAACGAGACTCGCCGATGCACATGTCGCGACGCAGTTCGATCGCGGCGATGTTCAATCCGACTCTGGACAGCGTGGCGACCCTGAGCAGCGGGATCTTTTCACATGTCGCGGGCACGTACGACAGAGGAAGCCTCATCGCGGACTCCCTGCTTCAAGATAATTTCAAGTCGGAAACGCTACAGAATCTTTTCAGTACCTCGAATTTCGGTCCGACTAAGAAGACGAAAAAGCATCGGAACGACACCGACGCGCCGCGCAGATGGAACGATCACAACCGCTCGCTTGGCAATAGGCCTAAGGGGCAACACAGCGCGCCGCGAGGAGGACCGCCTAGATCTTGGACGAATAACGAGCTTACGTTGGCTCTGCAACATGTTTGGGAGAAAAAACTAACCACGTCGCAGGCTAGTCGCATGTTCGGTATTCCGTACAACAGTCTTCTGATGTACGTGCGCGGGAAGTACGGGAAGAGTCTGAAGCTCGAACAACTGCGGAGGGACTGTATCGGTGCTAGTAATCCCGAAATTGTGAACAATAACAATGTCAAATCCATCCAGCAGTCCGTGCAGATGAGCCACGCGCTCACGACTGGCCTGCCGCTGCAGCATCCCGGGGATAACGCCGCTTTCGGACCGCGTTCCCTGCTAGGCGGCAATCTGCCGCAACCGCAGGGTTTCTACCCCGCCGATTTTACACCTTCGACCTTTCCTATGCCAGTGAATATGGCGCATCTGTTACCTGTGAGCGAGCAGAACAGCTTCGAACCTACTGTGAACTCGAGCGGGGACAGTGGCGGTAGTGGAGGTGTAGGTGGAAGTGCAGCCGGAGGCGGAGACGGGAACAGCGGTAATGGCGGCGACCTAACGAACTCGCAGACTAGCGAAACACCATCGCCCGTCGTCGATCATCATCTTCATCATCACGAATCGTCGATGCAGCCACAACCGCCGCAGTCGATGCCCGCCTTGCTGCAGCAGAATGGATCTGACTAG
Protein Sequence: MSSVGDSPDIMQSHDHYSLRWNNHQNHILQSFEELLEEESYVDVTLICAETSLKAHKVVLGACSPFFRRIFAEHPCKHPLIVLKDFTRAELNALIIFMYRGEVKVAQEELPGLMKAAECLQVRGLSTSEPRPVSAEPRQSPLCAMHDLLSEPLTPEAARPATPEEDENAMETSREIPPILFQPTRDQAKVPLISNMSFGIRDSCGSPLPRRKQARPRRRSGELPQDLSRRSSPLTSSSPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSVKKPVSPSDLDQHHVKTEGSEATSSPRGSPLTGTSLLHSDGPVQDIPNAAAVAAAVAVTIPTMSTLSLPQSHPPEYLTNLGQLARQWLPGHPPSQLPPPPLQAHHQREESPHGPGNPSSHPYQQQQRDSPMHMSRRSSIAAMFNPTLDSVATLSSGIFSHVAGTYDRGSLIADSLLQDNFKSETLQNLFSTSNFGPTKKTKKHRNDTDAPRRWNDHNRSLGNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRDCIGASNPEIVNNNNVKSIQQSVQMSHALTTGLPLQHPGDNAAFGPRSLLGGNLPQPQGFYPADFTPSTFPMPVNMAHLLPVSEQNSFEPTVNSSGDSGGSGGVGGSAAGGGDGNSGNGGDLTNSQTSETPSPVVDHHLHHHESSMQPQPPQSMPALLQQNGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01269913;
90% Identity: iTF_01268184;
80% Identity: iTF_01271343;