Pgra002071.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- ZMIZ1
- Assembly
- GCA_002006095.1
- Location
- NW:420980-447679[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 1.8e+03 -1.9 0.2 11 24 473 486 470 490 0.87 2 2 1.1e-26 6.2e-23 79.6 1.5 1 50 555 604 555 604 0.98
Sequence Information
- Coding Sequence
- ATGGTAGCAGCTGCCTCCGCTACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAGGACATCCCCGCGCAGTTTAACCAAATGCAGAGCCAACATGGAATGCCTCATCAGACATACAATACGGGGTACGGAGGACCCCAAAGAGGACCAATTCATGGAATCGGACCAGTCGGGATGAACAACTTCAACGCTATGGGAACGATGAGCCCGATAAACCCCATGCACTCTATGAACACTCTGAATACCATGAATTCGATGAACAGTATGAGCTCAATGAATCCTATGACAATGGGAGGAATGAACAGTATGAACAGTATGAATGCTATGAGCGGAATGACGCCCATGAACACCATGAGCAACATGAGTAACATGACCATGAACAACATGATGGGACCCAACAACATGCAGATGAACAAGATGCAGCGTACGCGTTTGCCCTTCCAGGCTCAAACGCATCAGGGCTATCCGCGAAGACTGACGCCTTATCCGAGTGCGACCATGCATTTGGCGCAGAAGCGACAGCAGTCTCCGTACGCTCAGAATCCGGCGGCCATGCAGCAGAATTTCAACGGCATGACAGCGTCGCAGTATCAGACCAATTATCCCGCTGGCGCGAGACCGAACTTCCAACAGCAATATCAGCCCATGCAGAATATGAATCCCGCCGCGGCCGGTTTCGGACCCTTGATCCGGGCAACAAACATGAGGCCTCAATCGGTGCCCGCTTACAACACCGCGTCTCAAGCCGCCACGAATCACCAATACGGCGGTTACGGTGGCACCAACGTTCCTGTCTGCATGGTCCCCCCTACTCAGGTCAACAATCAGTTCGTCAGTCATCAGGCGAACACGGGATACGGCGGCGGTAACTCGTCGTATGGCGCGTCCGTTGTTACGACCAGTCAGTATCAAACAGACGTGGCGTCAATGAGAACGACGAATAGCGGCAATATGAACTATCAGCACAGTCCTATTCCTGGCAATCCGACGCCTCCGTTAACCCCCGCTACCAGCATGCCGCCTTACATCAGTCCGAATCCGGACCCAATTAATCCACCTAACTTCAACGAAATGAAATCGCCTGTCAACAGTCAAAATGATGAATTGAGACTAACATTCCCTGTGAGAGACGGCATTATTCTTCCACCCTTCCGACTGGAGCACAATCTGGCTGTTAGCAATCACGTGTTTCAGCTGAAACCCACGATACACCAAACGCTAACGTGCCGGCCGGATCTGGAGCTGCAGCTCAAGTGTTTCCATCACGAGGATAGGCTAATGAATACGAATTGGCCGAGCAGTGTGCAAGTTTCCGTTAACGCGACTCCCCTTGTGATCGATCGCGGAGAGAACAAAAATTCTCACAAGCCTCTCTACTTGAAGGACGTCGCTCAAGCAGGAAGGAACACAATACAGATTACTGTGTCGGCCTGCTGTTGCTCGCACCTTTTCGTACTTCAATTGGTTCATCGACCGACCATACGAAGCGTGCTGCACGGATTGCTACGTAGAAGGCTGTTGCCGGCAGACcaatgtatacaaaaaatcaaaagaaactTCAGTAATACGATGTCGAACAACGGCATACAGGAGAAAGAAGTAGTAGAACAAACAGCACTAAAGGTGCGTAGAAGCTACGTAGAAGATCTGAAGgtgTCATTAAAATGTCCTATTACGTTTAAACGAATTACACTGCCAGCTAGAGGATATGACTGCAAGCATATACAATGTTTCGATTTGGAATCGTACTTGCAATTGAATAGCGAACGAGGCACCTGGAGATGTCCAGTGTGCACaaaaccCGCACCTTTGCAAGAAGGCCTTGAAGTCGATCAATATATGTGGGGCATTTTGAATACGCCGACTACCACGGACGTCGAAGAGGTGACGATAGACTCGGTCGCTAACTGGAAGATCACAAAGGTCATAACCAGCATCAAGACTGAGGAAGAGAGCGATTGCAAACGAACGGTCAAAGCCATGTCGCCGGGTAGCATGACTATGCCAACTATGAACTGGGATATGAATCAGGCAATGAGCCCTTACCTTCCTTCGCCTGATATGAACACTATTATGAGCGGCTCGATGATGAACAACTCGTCGTACGCGAATAACAGCATAAATCATCGGAACACATCGGGCGGAACGTACGAGATAAATTCCGGAACGAATACCATCGGCAATAACGATTACACCAGCGGGGCGGGCCCGCTCTCGCATTTAAATGATTCTGTCGAAAGGATTGCCTTGGATCCTCTCAACGCGATGGAAAAATCGCTCAATGATCAGATGCCTCATACGCCGCATACACCGCACACTCCGCAATCTACTCCTCATACGCCAGCTGGTGGAGCTAGCGGTCCACCAAGCGTTCCGCCCGCCTCGCAGGAGTCCACGGGAAATCACAATACCTCCGGCAATACGAATACTACTATAAATAATGATACCACGACGGATATACCGTCCGACTTAAATTTCGATCCCGCTGCAGTCATAGACGGGGAGAGCACCGGTCAGGAAGCGCTAAATCTCTTGCCGGACAATGTGGACGCGATGGAACTCCTCTCTTATCTCGATCCACCGGACCTAAACACTCCGCCTAGCAGTGGTGCCAGCAGCGGTAATCCTTCCTCCAATGACGATATATTGGCATTCtttgaataa
- Protein Sequence
- MVAAASATATATASVVAMQDRQDIPAQFNQMQSQHGMPHQTYNTGYGGPQRGPIHGIGPVGMNNFNAMGTMSPINPMHSMNTLNTMNSMNSMSSMNPMTMGGMNSMNSMNAMSGMTPMNTMSNMSNMTMNNMMGPNNMQMNKMQRTRLPFQAQTHQGYPRRLTPYPSATMHLAQKRQQSPYAQNPAAMQQNFNGMTASQYQTNYPAGARPNFQQQYQPMQNMNPAAAGFGPLIRATNMRPQSVPAYNTASQAATNHQYGGYGGTNVPVCMVPPTQVNNQFVSHQANTGYGGGNSSYGASVVTTSQYQTDVASMRTTNSGNMNYQHSPIPGNPTPPLTPATSMPPYISPNPDPINPPNFNEMKSPVNSQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTIHQTLTCRPDLELQLKCFHHEDRLMNTNWPSSVQVSVNATPLVIDRGENKNSHKPLYLKDVAQAGRNTIQITVSACCCSHLFVLQLVHRPTIRSVLHGLLRRRLLPADQCIQKIKRNFSNTMSNNGIQEKEVVEQTALKVRRSYVEDLKVSLKCPITFKRITLPARGYDCKHIQCFDLESYLQLNSERGTWRCPVCTKPAPLQEGLEVDQYMWGILNTPTTTDVEEVTIDSVANWKITKVITSIKTEEESDCKRTVKAMSPGSMTMPTMNWDMNQAMSPYLPSPDMNTIMSGSMMNNSSYANNSINHRNTSGGTYEINSGTNTIGNNDYTSGAGPLSHLNDSVERIALDPLNAMEKSLNDQMPHTPHTPHTPQSTPHTPAGGASGPPSVPPASQESTGNHNTSGNTNTTINNDTTTDIPSDLNFDPAAVIDGESTGQEALNLLPDNVDAMELLSYLDPPDLNTPPSSGASSGNPSSNDDILAFFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267229;
- 90% Identity
- iTF_01268676;
- 80% Identity
- -