Pcoc021085.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- Zmiz1
- Assembly
- GCA_014839585.1
- Location
- QVOB01022409.1:1-6675[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.35 4.1e+03 -2.0 0.2 11 24 505 518 502 522 0.87 2 2 5.1e-20 6e-16 58.3 0.5 1 41 596 636 596 641 0.92
Sequence Information
- Coding Sequence
- CCGGCAGTGATCGCGACAGCATCAACAACGGCGGCGATCGGCGTCGGAGTGCAGCCGTTATCATCCGGCTATCACAGCGCAGCGCCACCTCAGAACGGGAGGGGTGGTTCGCCACTTCGTGTCGCGGCGATGGTAGCAGCTGCCTCCGCTACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAAGACATCCCCGCTCAGTTCAACCAAATGCAGAGCCAACATGGAATGCCTCATCAGACATACAACGCGGGGTACGGCCAAAGAGGACCAATTCATGGAATCGGGCCAGTCGGGATGAACAACTTCAACGTTATGAGCCCGGTGAATGCCATTCATCATTCTATGAACACTTTGAATTCCATGAATTCGATGAACACTATGAGTTCGATGAATCCCATGACAATGGGAGGAATGAATGGTATGAACAGTATGAATGCTATGAACGGAATGACGCCCATGAACACCATGAGCAACATGAATAACATGGCCATGAACAACATGATGGGACCCAACAACATGCAGATGAACAAGATGCAGGCTCAAACGCACCAGGGCTATCCGCGAAGACTGACGCCTTATCCGAACGCGGCCATGCATATGGTGCAGAAGCGACAGCAATCCTCGTACGCTCAGAATCCGGCGGCGATGCAGCAGAATTTCAACAGTATGACGGCGTCGCAGTATCAGAACAACTATCCCGCTGGCGCGAGGCCGAACTTCCAACAGCAATATCAGCCCATGCAGAATATGAATCCCGCCGCCGGTTTCGGGCCGAGCGCTATGATCCGGGCGACAATGAGGCCCCAATCGGTGCCCGCTTACAACACCGCGTCTCAAGCCGCCACGAATCATCAGTACGGTGGTTACGGCGGCAACAACGTTCCTGTCTGCATGGTCCCCCCTACTCAGGTCAACAATCAGTTTGTCAATCATCAGGCGAACACGGGATACGGCGGCGGTAACTCGTCGTATGGCACGTCCGTTGTTACGACCAGTCAGTACCAACCAGACGTGGCATCAATGAGAACGACGAACAGCGGTAATATGAACTATCAGCACAGTCCTATTCCCGGCAATCCGACGCCTCCGTTAACCCCCGCCACCAGCATACCGCCTTACATCAGTCCGAATCCGGACCCAATCAAACCACCTAACTTCAACGAAATGAAATCGCCTGTCAACAGTCAAAATGATGAATTGAGACTAACATTCCCTGTGAGAGACGGCATCATTCTTCCACCCTTCCGACTGGAGCACAATCTGGCTGTTAGCAATCACGTGTTTCAGCTGAAACCCACGGTACACCAAACGCTTACGTGGCGGGCAGATTTGGAGCTGCAGCTCAAGTGTTTCCATCACGAGGATAGGCTAATGAATACGAATTGGCCGAGCAGTGTGCAAGTTTCCGTTAACGCGACTCCCCTTGTGATCGATCGCGGAGAGAACAAAACTTCTCACAAGCCTCTCTACTTGAAGGACGTCGCTCAAGCAGGAAGAAACACAATACAGATTACTGTGTCCGCCTGCTGTTGCTCGCACCTCTTTGTACTTCAATTGGTTCATCGACCGACCGTACGAAGCGTCCTGCACGGATTGCTACGTAAAAGGCTGTTGGCGGCAGAACAATGTATACAAAAAATCAAAAGAAATTTCAGTAATACGATGTCGAACAACGGCATACAGTCGGAGAAAGACGTAGTGGAACAAACAGCACTAAAGGTGCGTAGAAGCTACGTAGAAGATCTGAAGGTAAAATACTTGAGATGCCTCCAGGTGTCATTAAAATGTCCTATCACGTTTAAACGAATTACACTGCCAGCTAGAGGACATGACTGCAAGCATATACAATGTTTCGATTTGGAATCGTACTTGCAATTGAATAGCGAACGAGAATCGGATTATTGTATTTTGTCTACGCCGACTACCGCGGACGTCGAAGAGGTGACGATAGACTCGGTCGCTAACTGGAAGATCGCGAAGTGCATAACCGGCATCAAGACTGAGGAAGAGAGCGATTGCAAACGAACGGTCAAAGCCATGTCGCCGGGTAGCATGAGTATGCCAACTATGAATTGGGATATGAATCAGGCAATGAGTCCTTACCTTCCTTCGCCTGATATGAACAGTATTATGAGCGGCTCGATGATGAACAACTCGTCGTACGCGAATAACAGCATAAATCATCGGAACACATCGGGCGGAACGTACGAGATAAATTCCGGAACGAATACCATTAATAACGATTACACCGGCGGAGCGGGTCCGCTCTCGCATTTAAATGACTCTGTCGAAAGGATTGCCTTGGATCCTCTCAACGCGATGGAAAAATCGCTCAATGATCAGATGCCTCATACGCCGCACACACCGCACACTCCGCAATCAACTCCTCATACGCCAGCTGGTGGAGCTAGCGGTCCACCAAGCGTTCCGCCCGCCTCGCAGGAATCTACGGGAAATCACAATACCTCCGGCAATACAAGCACTACAATAAATAATGATACCACGACGGATATACCGTCCGATTTAAATTTCGATCCCGCTGCAGTCATAGACGGGGAAAGCACCGGTCAGGAAGCGCTAAATCTCTTGCCGGACAATGTGGACGCGATGGAACTCCTCTCTTATCTCGATCCACCGGACCTAAACACTCCGCCTAGCAGTGGTGCCAGCAGCGGTAATCCTCCCTCCAATGACGATATATTGGCATTCTTTGAATAA
- Protein Sequence
- PAVIATASTTAAIGVGVQPLSSGYHSAAPPQNGRGGSPLRVAAMVAAASATATATASVVAMQDRQDIPAQFNQMQSQHGMPHQTYNAGYGQRGPIHGIGPVGMNNFNVMSPVNAIHHSMNTLNSMNSMNTMSSMNPMTMGGMNGMNSMNAMNGMTPMNTMSNMNNMAMNNMMGPNNMQMNKMQAQTHQGYPRRLTPYPNAAMHMVQKRQQSSYAQNPAAMQQNFNSMTASQYQNNYPAGARPNFQQQYQPMQNMNPAAGFGPSAMIRATMRPQSVPAYNTASQAATNHQYGGYGGNNVPVCMVPPTQVNNQFVNHQANTGYGGGNSSYGTSVVTTSQYQPDVASMRTTNSGNMNYQHSPIPGNPTPPLTPATSIPPYISPNPDPIKPPNFNEMKSPVNSQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLTWRADLELQLKCFHHEDRLMNTNWPSSVQVSVNATPLVIDRGENKTSHKPLYLKDVAQAGRNTIQITVSACCCSHLFVLQLVHRPTVRSVLHGLLRKRLLAAEQCIQKIKRNFSNTMSNNGIQSEKDVVEQTALKVRRSYVEDLKVKYLRCLQVSLKCPITFKRITLPARGHDCKHIQCFDLESYLQLNSERESDYCILSTPTTADVEEVTIDSVANWKIAKCITGIKTEEESDCKRTVKAMSPGSMSMPTMNWDMNQAMSPYLPSPDMNSIMSGSMMNNSSYANNSINHRNTSGGTYEINSGTNTINNDYTGGAGPLSHLNDSVERIALDPLNAMEKSLNDQMPHTPHTPHTPQSTPHTPAGGASGPPSVPPASQESTGNHNTSGNTSTTINNDTTTDIPSDLNFDPAAVIDGESTGQEALNLLPDNVDAMELLSYLDPPDLNTPPSSGASSGNPPSNDDILAFFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268676; iTF_01267954; iTF_01269478; iTF_01270879;
- 90% Identity
- iTF_01268676;
- 80% Identity
- -