Pfla000492.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- LZTR1
- Assembly
- GCA_014825475.1
- Location
- QVNW01000189.1:6442-9651[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-09 5.9e-07 30.0 0.0 2 106 320 457 319 461 0.77 2 4 1.8 6.8e+02 0.9 0.1 67 106 451 489 449 492 0.84 3 4 2.3e-19 8.7e-17 61.7 0.1 9 96 555 642 547 658 0.86 4 4 1.7 6.3e+02 1.0 0.0 76 100 656 680 651 689 0.79
Sequence Information
- Coding Sequence
- ATGAAATACATACCGTTTTTTTCATGCCCGAAAATGGACAGAATGCCAACAACCGAATGCCTGACTCTGGATTTCGGACCGTTCGAGACGGTGCACCGATGGCAGCGTATGCCGGAGTGCGACGAATTCGTCGGAGCCAGACGAAGCAAACACACCGTTGTCCCGTATAAAGATGCAATTTATGTATTCGGCGGTGACAATGGTAAGACAATGTTGAACGATTTGCTACGCTTTGATGTGAAAGAGAAATCTTGGGGAAGAGCATTTGCAACGGGACCCCCACCAGCGCCACGCTATCATCATTCTGCGGTTGTTGATGGTTCATCAATGTTTGTATTTGGCGGCTATACGGGAGACATTCATTCTAATTCTAATCTGAGTAATAAAAACGATCTCTTTGAGTATCGCTTCCAAACTGGCCAGTGGATAGAATGGAAATATGTTGGAACGTGTCCAGTGCCTCGATCTGCTCACGGTGCTGCTGTGTATGATAACAAATTATGGATATTTGCTGGCTATGACGGCAATGCCAGATTGAATGATATGTGGACGATATCATTGGTGCCTGGTGATTCCAAAGAGTGGGAAGAAGTTGATCAAAAGGGCGAACTTCCGCCGACATGTTGCAATTTTCCTGTTGCGGTAACTCGAGAATCTATGTTCGTTTTCAGCGGACAGAGCGGCGCCAAGACAACGAACGATCTTTTCCAATTTCATTTTAACGAAAGGCGATGGACGCGTTTATCGACGGAACATATATTACGCCACGCACCACCACCGCCTGCGCGCCGATACGGTCACACGATGATACCGCCTTGTCGACTCTTCCACGCCGCCACTGTGATCGGAGACGCGATGTTCATGTTCGGCGGAACCATCGACAACAACGTACGTTCCGCCGAGATGTTCCGCTTCCAGTTTGCCTCGTATCCGAAGTGTACGTTGCACGAAGACTTCGGCAGATTGTTGAGCAATCGTCTCTTCTGCGACTTGGAGTTTATTGTGGGACCGGAAGAGACTAGGATACCGTCGCACGCAGCCATGATCGCGGCACGCTCGGAATTTCTCAGGACGCGTATTCGACAAGCGCGTGAAAAGAGGAATTTATATTTAGAGGAAGTATACGGTACCGCTGATGTTCCTGTTAAAGACTTGCCGTTGCTGGAGGTGACGCTAAAAGATACCGCGCCAGAACCTTTTGAGCTGGTACTAAGATACATTTACACCGATCGCATTGATCCTACTGAAACATTGATCGACAAAACTGAAAATCCACAAAGCAATCGCATCGTTTGCCTCATGATGGATGTGTATCGTATTGCTGTGGGATTTGACATGAAGCGCTTGGAGCTGCTGTGCGTCAATTATCTCGAGGCGACTATAACTCACACCAACGTCCTGGAGGCATTGCGCAACGCCGTCGATTTGAAATTGTACTTTCTCAAGGAGTTTTGCCTTAGCTTTGCCGTAAGAGACGGCAATTACAATCTGATCGTGATGAGCCAAGAGTTCGAGACTCTGAATCAACCGCTGATGGTAGAAATCATAAGACGTCGGCAAATGCCTCAAGCTAAACCTTTAATGAAATATGAAAACGACTCCGTTATCCGTACTGGCTTGGAGCAAGATATGCAAGCATTTTTGAAGGGTGCTATCGGTGTGGAATTTGCTGACATTACATTGATGCTGGACGGTACGCCGATATCGGCGCACAAGGCCGTTCTTGCGGCACGGTGTAGTTACTTCGAAGCGATGTTTCGATCTTTCATGCCCGAAGATAGTAAAGTGAACATACAAATCGGCGATATGGTACCGTCGTCCGAATCGTTTCATTCTTTGCTGAGATATATTTATTACGCGGACACTTCGATGCCTCCCGAGGACTCTTTATATTTATTTACCGCACCGATATTCTACGGTTTTACGAACAACCGGCTTCAGGCGTTTTGTAAACAGAATCTTGAGATGAACGTTACTTTTCAAAACGTTATAGAGATTTTAGAGGCAGCCGACAAGATACAAGCTACCGATATGAAGAAATACGCTTTGAATCTCATAGTTCATCACTTCACCAAGGTTGTTAGACTTCCGAGATTGCAACAGTTAAGTCGTAAGCTCTTGCTGGATATTCTCAAGGCTTTGGGTGACGAACGTTCCGAAGCTAGATCGTGTTTAGATATGACAAACGATTGCTGA
- Protein Sequence
- MKYIPFFSCPKMDRMPTTECLTLDFGPFETVHRWQRMPECDEFVGARRSKHTVVPYKDAIYVFGGDNGKTMLNDLLRFDVKEKSWGRAFATGPPPAPRYHHSAVVDGSSMFVFGGYTGDIHSNSNLSNKNDLFEYRFQTGQWIEWKYVGTCPVPRSAHGAAVYDNKLWIFAGYDGNARLNDMWTISLVPGDSKEWEEVDQKGELPPTCCNFPVAVTRESMFVFSGQSGAKTTNDLFQFHFNERRWTRLSTEHILRHAPPPPARRYGHTMIPPCRLFHAATVIGDAMFMFGGTIDNNVRSAEMFRFQFASYPKCTLHEDFGRLLSNRLFCDLEFIVGPEETRIPSHAAMIAARSEFLRTRIRQAREKRNLYLEEVYGTADVPVKDLPLLEVTLKDTAPEPFELVLRYIYTDRIDPTETLIDKTENPQSNRIVCLMMDVYRIAVGFDMKRLELLCVNYLEATITHTNVLEALRNAVDLKLYFLKEFCLSFAVRDGNYNLIVMSQEFETLNQPLMVEIIRRRQMPQAKPLMKYENDSVIRTGLEQDMQAFLKGAIGVEFADITLMLDGTPISAHKAVLAARCSYFEAMFRSFMPEDSKVNIQIGDMVPSSESFHSLLRYIYYADTSMPPEDSLYLFTAPIFYGFTNNRLQAFCKQNLEMNVTFQNVIEILEAADKIQATDMKKYALNLIVHHFTKVVRLPRLQQLSRKLLLDILKALGDERSEARSCLDMTNDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270602; iTF_01267652; iTF_01266952; iTF_01271310; iTF_01268367; iTF_01269141;
- 90% Identity
- iTF_01267652; iTF_01266952; iTF_01270602; iTF_01271310; iTF_01268367; iTF_01269141;
- 80% Identity
- -