Pfla010424.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- SPAC16A10.02_1
- Assembly
- GCA_014825475.1
- Location
- QVNW01003097.1:9154-9715[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.19 4.5e+03 -2.4 0.1 28 37 12 22 6 22 0.63 2 2 9.4e-29 2.2e-24 85.1 0.5 1 51 49 100 49 101 0.97
Sequence Information
- Coding Sequence
- ATGCCAAAATCAAAAGAATATGTATCTAGCAGTGATGACAGCGAAGAGGAAAAAAAATCAAAAAAGAAACAAAAGAAACAGAGAACCTCAGATGAAGATAAACCATTACCAAAAAAAGCAAAAACAGAGGATGAAGAATCTGTTTGGGATTTAGGCAACAATCGTCAAGTAAATGTGAGAAATTTCAAAGGCAAATATTATGTAGATATCCGAGAAATGTATTATGACAAGGATGGTGATTTGAAACCTGGGAAGAAAGGGATATGTTTGACTATACAACAATGGCGAAAACTTATGGATGTTATTCATGAGATAGATAAAGTTGCAAAATCAAAATGTTAA
- Protein Sequence
- MPKSKEYVSSSDDSEEEKKSKKKQKKQRTSDEDKPLPKKAKTEDEESVWDLGNNRQVNVRNFKGKYYVDIREMYYDKDGDLKPGKKGICLTIQQWRKLMDVIHEIDKVAKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01269070;
- 90% Identity
- iTF_01269070;
- 80% Identity
- -